| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3371 |
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| Symbol | |
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| ID | 3567239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3630039 |
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| End bp | 3631190 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681843 |
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| Product | peptidase S1 and S6, chymotrypsin/Hap:PDZ/DHR/GLGF |
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| Protein accession | YP_286570 |
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| Protein GI | 71908983 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family
[TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 70 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGGT TGTGGCAGAT TTTTGCACAA ACGGTCACCG TTGCGCTCGC CATTCTGTTC
GTCGTCTCCA CGCTGAAACC GGAATGGCTG CCGCAACGAC AGGGTGTCGT TGCACTCCAG
GAAGCGCCGA CCACCGGCGA CGAGATCAAG AGCACACCGG GCTCCTATCG CGATGCGGCA
CGCGCCGCCT TGCCCTCGGT AGTACACATC TACACGACAC AGGAAATCAA GCAGCAGCGC
CACCCGCTGT TCGATGACCC GATCTTCCGC CATTTCTTTG GCGACCGCCC GGAAGGCCAA
CCGCAGCGTA ACTCCGGCCT CGGTTCCGGC GTCATCGTCA GCCCCAACGG CTACATCCTG
ACCAACTACC ACGTCATCGA AGGCGCCGAC GACATCCAGG TCTCGCTCAA CGACACCAAG
ACCTACAAGG CGAAAATCGT CGGGAGCGAC CCGGAATCCG ATCTCGCCAT CCTGCAAATA
AAGGCCGACA AGCTGCCGGC GATCACCTTC GGCCAGATGG ACAACCTGCG CGTCGGCGAT
GTCGTGCTCG CCATCGGCAA CCCGTTCGGT GTCGGCCAGA CAGTCACCAT GGGCATCGTC
TCCGCCCTCG GTCGCTCGCA CCTCGGCATC AACACCTTCG AGAACTTCAT CCAGACCGAC
GCCGCGATCA ACCCCGGCAA CTCCGGTGGC GCGCTGGTCG ACATTCACGG CAACCTGGTC
GGCATCAACT CGGCCATCTA CTCGCGCACC GGGGGCTCGC TCGGCATCGG CTTCGCCATC
CCGGTGTCCA GTGCCCGCAG CATCATGGAG CAGATCATCC GCACCGGCAC CGTGACCCGT
GGCTGGATCG GCGTCGAGGC CCAGGAAATC ACGCAGGAAC TGGCCGAATC CTTTGGCCTG
CCGGACAACG AAGGCGCCCT GATTGCGGGT GTGGTGCGCA GCAGCCCGGC CGACACAGCC
GGCATCCGCC CCGGCGATGT GCTGCTCTCG GTCGATGGCA AGCCTGTCCA GGATCCGCAA
GTCATGCTCG ACCTGATTGC CGCACTGACT CCGGAGGAAC GCTCCGCTTT CCGCCTGCGT
CGCGGCAAGA ACATCGTCGA GGTTCAGGTC AGGATCGGCA AGCGTCCGGC CATGCGGGCC
GAACAGGAGT AA
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| Protein sequence | MQRLWQIFAQ TVTVALAILF VVSTLKPEWL PQRQGVVALQ EAPTTGDEIK STPGSYRDAA
RAALPSVVHI YTTQEIKQQR HPLFDDPIFR HFFGDRPEGQ PQRNSGLGSG VIVSPNGYIL
TNYHVIEGAD DIQVSLNDTK TYKAKIVGSD PESDLAILQI KADKLPAITF GQMDNLRVGD
VVLAIGNPFG VGQTVTMGIV SALGRSHLGI NTFENFIQTD AAINPGNSGG ALVDIHGNLV
GINSAIYSRT GGSLGIGFAI PVSSARSIME QIIRTGTVTR GWIGVEAQEI TQELAESFGL
PDNEGALIAG VVRSSPADTA GIRPGDVLLS VDGKPVQDPQ VMLDLIAALT PEERSAFRLR
RGKNIVEVQV RIGKRPAMRA EQE
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