Gene Daro_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3364 
SymbolsucC 
ID3567232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3621437 
End bp3622597 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content58% 
IMG OID637681836 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_286563 
Protein GI71908976 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC ACGAATATCA GGGCAAACAA ATCCTGAAGA AATTCGGCGT TACGGTTCCG 
CGCGGGATTC ACTGCACGAC CGTCGAAGAC GCAGTCAAGG CAGCCGAAAC CCTGGGCGGC
AAGGTCTGGG TCGTCAAAGC CCAGATTCAC GCTGGTGGCC GTGGCAAGGG TGGTGGCGTC
AAGGTTGCAA CCTCGCTCGA AAAAGTTCGC GAGTACGCCG GCCAGATTCT CGGCATGCAG
CTGGTCACGC ACCAGACCGG TCCGGAAGGC CAGAAGGTCC GTCACCTGCT GATCGAAGAA
GGCGCTGACA TCAAGCACGA GTACTACGTT GCTGCGCTGA CCGACCGCGC CACCCAGTCC
GTCGCCATCA TGGCGTCGTA CGAAGGCGGC ATGGACATCG AGGAAGTTGC CCACAAGACC
CCGGAAAAGA TCGTCAAGGT CTTCGTCAAT CCGCTGGTTG GTCTGACCGA CGAGCAGGCC
CTGACCCTGG CCAAGGGCAT GGGCATGAAC GAAGCTTCGA TTCCGCAGTG TATCGAGACG
CTGAAGAGCC TGTACACCTG CTACATGGAA ACGGATGCTT CGCTGGCCGA AATCAATCCG
CTGATCCACG AAGGCGACGG CACCGTCAAG GCACTCGACG CCAAGTTCAA CTTCGACTCC
AACGCGCTGT ATCGTCAGCC GGAAATCGTC GCCATGCGCG ACCTGGACGA AGAAGATCCG
GACGAAGTCG AAGCTTCCCA GTTCGATCTG GCCTACATCT CCCTCGACGG CAACATCGGT
TGCCTGGTGA ATGGTGCCGG TCTGGCCATG GCGACCATGG ACACCATTAA GCTGTTCGGC
GCCGAGCCGG CCAACTTCCT GGACGTCGGC GGCGGTGCCA CGACCGAGAA GGTCACTGAA
GCCTTCAAGA TCATGCTCAA GAACCCGAAG GTCAAGGGCA TCCTGGTCAA CATCTTCGGC
GGCATCATGA AGTGCGACAC CATTGCCGAA GGCGTTGTTG CTGCAGCCAA GCTGACCCAC
CTCAGCGTGC CGCTCGTCGT GCGCATGAAG GGTACCAATG AAGATTTGGG CAAGAAGATC
CTGAAGGATT CCGGTCTGCC GATCATTTCT GCCGATTCCA TGGCCGAAGC CGCCACCAAG
ATCGTTGCTG CGGTCAAGTA A
 
Protein sequence
MKIHEYQGKQ ILKKFGVTVP RGIHCTTVED AVKAAETLGG KVWVVKAQIH AGGRGKGGGV 
KVATSLEKVR EYAGQILGMQ LVTHQTGPEG QKVRHLLIEE GADIKHEYYV AALTDRATQS
VAIMASYEGG MDIEEVAHKT PEKIVKVFVN PLVGLTDEQA LTLAKGMGMN EASIPQCIET
LKSLYTCYME TDASLAEINP LIHEGDGTVK ALDAKFNFDS NALYRQPEIV AMRDLDEEDP
DEVEASQFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG AEPANFLDVG GGATTEKVTE
AFKIMLKNPK VKGILVNIFG GIMKCDTIAE GVVAAAKLTH LSVPLVVRMK GTNEDLGKKI
LKDSGLPIIS ADSMAEAATK IVAAVK