Gene Daro_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3343 
Symbol 
ID3568298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3597306 
End bp3600512 
Gene Length3207 bp 
Protein Length1068 aa 
Translation table11 
GC content61% 
IMG OID637681815 
Productacriflavin resistance protein 
Protein accessionYP_286542 
Protein GI71908955 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0450597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCACG ATAACGGTCG CCTCGGTATT TCCGGGCGCA TTGCCGCCGC CTTCCAGTCT 
TCGCGGATGA CGCCCTTGCT GGCGTTGGTC GCCTTCCTGA TGGGGTTGTT TGCAACGCTG
GTCACGCCGC GCGAAGAAGA GCCACAGATC GATGTGACCA TGGCCGACGT GCTGGTCGCC
TTTCCCGGTG CTTCGGCCAA GGATGTCGAG AACCTGGTCG CACGGCCGGG CGAGCAGGTG
CTGTCGCGCC TGCATGGCGT TGAACATGTC TATTCGATGT CGCGTCCCGG CATGGCGGTG
ATTACCGTGC AGTTCGAGGT TGGCGTCAAA TACAACGACG CCGTCCTGCG TCTTTACGAT
ACGGTGCATT CGAATCGTGA CTGGCTGGCG CCCAATCTCG GCGTGCAGGA GCCGGTGGTC
AAGCCGCGTG GCATCGACGA CGTGCCTATC GTCTCGTTGA CTTTCTGGAC GCCGGACCCG
GCCCGTTCTG CCTTCGACCT GCAGCAGGTG GCGCGCGCGG TCGAAATCGA ACTGAAGCGC
ATCAAGGGGA CGCGCGATGT GTCCACCCTT GGTGGTCCCG ATCACGCCAT CCGCATCCTG
ATGGATGCCG AGCGGATGAA CGCTTTTGGC GTCACGCCGC AGGATATTGC CGGCGCCCTG
AAGGTTTCGA ATGCCTTGCA GTCCTCCGGC AGCCTGACTA CGGGCAATCG TGAGGTGCTG
GTGCAGACCG GGACTTATCT CGAATCGGCC GCCGATGTGA AACGTCTGGT CGTCGCCGTC
CGCGAGCGCA AACCGATCTA CATGAGCGAT GTGGCGATGG TTGAGGACGG TCCCGACCAG
CCGAAGCGCT ATGCCTGGTT TGGCAACAAG TCTGGCGAAT TTCCGGCGGT GACCATCCAG
CTGTCCAAGC AGCCGGGTGT CAACGCCGCC GATGTGGCGA GTGGCGCCAT TGCACGCATC
GAGGCGTTGA AGAACACGGT TATTCCGGAG GGGGTCGAAG TGACCGTCAC CCGCAACTAC
GGAGAAACGG CGACTGAAAA GGCGCAAAAG CTGATCGGAA AGCTGATCTT CGCCACCGCT
TTCGTCGTGG CGCTGGTCTT CTTCGCGCTT GGCCGTCGTG AGGCGGTGAT CGTCGGCGTG
GCCGTGACGC TGACCCTGGC GGCGACGCTG TTTGCTTCCT GGGCCTGGGG CTTCACGTTG
AATCGCGTTT CGCTGTTCGC ACTGATTTTC TCGATCGGCA TCCTGGTTGA TGACGCCATT
GTCGTGGTCG AGAACATCCA TCGCTGGCAG GGGCTGCATC CCGAGAAAAG TCTGCTCGAA
ATCATTCCGG GCGCGGTCGA CGAAGTGGGC GGACCGACTA TTCTGGCGAC GCTGACCGTG
ATCGCGGCGC TGCTGCCGAT GGCTTTCGTT TCAGGCCTGA TGGGGCCGTA CATGAGCCCG
ATTCCGATCA ACTCGTCGAT GGGCATGGCC ATTTCGCTGG CCGTGGCCTT TATCGTGACG
CCGTGGCTGG CCGCCAGGCT GATGAAGTCA CACGGCAATG CGCATGGCCA GCCGAAGCCG
TCGAAGCTTG ATGCCAAACT TGACAGCACT TTCCGCAAGC TGCTGACCCC CTTCCTCGAT
CCGCTGACCG GTGGCGCCGC CCGTGTCAAA CTGGCCATTG TCGTCGTGCT GCTGATCCTC
GGTTCGGTCT CGCTGGCTTA CTTCCAGCTC GTCGTGCTGA AGATGCTGCC CTTCGACAAC
AAGAGCGAAT TCCAGATTGT GGTCGACATG CCGGTCGGTA CGCCGCTGGA AGAAACGGCG
CGGGTGCTGC ATGAGATTGG CGCCGAACTG GCCAGTGTGC CGGATGTCAT CAATTACCAG
GCCTATGCCG GGACGGCCAG CCCGATCAAT TTCAATGGCC TGGTCCGCCA GTACTACCTG
CGGGCGGTGC CGGAAAAGGG GGATCTTCAG GTCAATCTGG CCGACAAGCA TCATCGTTCG
CGGCAGAGCC ACGAAATCGC CGTTTCGGTG CGCGAGCGCA TCGAGGCCAT TGGCAAGCGC
AATGGTGGCG TCGCCAAGAT CGTCGAGGTG CCGCCAGGGC CGCCGGTGAT GTCGCCCATC
GTTGCCGAGG TCTATGGGCC GGATTACGCC GGTCAGATGG CGGTTGGCAA GCAGGTGCGC
GCCGCCTTTG AAAAGACGGC AGATGTTGTT GCGGTGGACG ACTATATCGA GGCCGATTCC
CGCAAGTTCG TATTGCATGT CATGCAGAGC AAGGCGGCGC AGATGGGCGT GGCGCAGAGC
GACATCGTCG AGGTGGTTGG CATGGGGCTG GCCGGGCAGG ACGTGACGCC AGCGCGCAAT
ACCGAATCGA AGTTCGAGAT TCCGGTGCGG GTGACGCTGC CGGCCGAAAA ACAATCCACG
CTTGATGCCT TGCTCAAGCT GCGTGTCCGT TCGCGTGACG GCCAGCTGGT GCCGGTTTCC
GAGCTGGTCG AAGTGCGTGA CGTGGCCCGC GAGAAGGCGA TCTATCACAA GGATCTGCTA
CCGGTCGTTT ATGTGGTCGG CGACATGGGC GGCAAGCTGG ATTCGCCGCT CTATGGCATG
TTCGACATCC GCTCCAAAAT CAACGGTATG GCGCTCAAGG AAGGCGGCGC GCTGGGCGAA
TGGTTCATTC GCCAGCCAGG CGATCCCTAC GCCGGCTACA GTGTGAAATG GGATGGCGAA
TGGCAGGTCA CCTACGAAAC CTTCCGCGAC ATGGGCATTG CCTACGCGGT CGGCCTGGTC
CTGATCTATC TGCTCGTGGT CGCTCACTTT GGCAGCTACC TCGTGCCGCT GATCATCATG
GCGCCGATTC CGCTGACCAT CATCGGCGTC ATGCCCGGTC ACGCCTTGTT CGGCTCGCAA
TTCACCGCCA CTTCGATGAT CGGCATGATC GCCCTGGCCG GCATCATCGT CCGCAATTCG
ATCCTGCTCG TTGACTTCAT CAAGCAGCAG GTGGCGGCTG GCATCAACTT CCACGATGCG
GTGATCCAGT CGGCGGCCGT CCGCGCCAAG CCTATCGCGC TGACGGCGCT GGCCGCCATG
CTTGGCGCCC TGTTCATTCT CGATGACCCG ATCTTCAACG GACTGGCGTT GAGCATGATC
TTCGGCATTC TCGTCTCCAC CCTGCTGACG CTGGTGGTGA TCCCGGTTCT TTATTACTCG
GCTTTTCGCA AGGAGCATCA ACAATGA
 
Protein sequence
MSHDNGRLGI SGRIAAAFQS SRMTPLLALV AFLMGLFATL VTPREEEPQI DVTMADVLVA 
FPGASAKDVE NLVARPGEQV LSRLHGVEHV YSMSRPGMAV ITVQFEVGVK YNDAVLRLYD
TVHSNRDWLA PNLGVQEPVV KPRGIDDVPI VSLTFWTPDP ARSAFDLQQV ARAVEIELKR
IKGTRDVSTL GGPDHAIRIL MDAERMNAFG VTPQDIAGAL KVSNALQSSG SLTTGNREVL
VQTGTYLESA ADVKRLVVAV RERKPIYMSD VAMVEDGPDQ PKRYAWFGNK SGEFPAVTIQ
LSKQPGVNAA DVASGAIARI EALKNTVIPE GVEVTVTRNY GETATEKAQK LIGKLIFATA
FVVALVFFAL GRREAVIVGV AVTLTLAATL FASWAWGFTL NRVSLFALIF SIGILVDDAI
VVVENIHRWQ GLHPEKSLLE IIPGAVDEVG GPTILATLTV IAALLPMAFV SGLMGPYMSP
IPINSSMGMA ISLAVAFIVT PWLAARLMKS HGNAHGQPKP SKLDAKLDST FRKLLTPFLD
PLTGGAARVK LAIVVVLLIL GSVSLAYFQL VVLKMLPFDN KSEFQIVVDM PVGTPLEETA
RVLHEIGAEL ASVPDVINYQ AYAGTASPIN FNGLVRQYYL RAVPEKGDLQ VNLADKHHRS
RQSHEIAVSV RERIEAIGKR NGGVAKIVEV PPGPPVMSPI VAEVYGPDYA GQMAVGKQVR
AAFEKTADVV AVDDYIEADS RKFVLHVMQS KAAQMGVAQS DIVEVVGMGL AGQDVTPARN
TESKFEIPVR VTLPAEKQST LDALLKLRVR SRDGQLVPVS ELVEVRDVAR EKAIYHKDLL
PVVYVVGDMG GKLDSPLYGM FDIRSKINGM ALKEGGALGE WFIRQPGDPY AGYSVKWDGE
WQVTYETFRD MGIAYAVGLV LIYLLVVAHF GSYLVPLIIM APIPLTIIGV MPGHALFGSQ
FTATSMIGMI ALAGIIVRNS ILLVDFIKQQ VAAGINFHDA VIQSAAVRAK PIALTALAAM
LGALFILDDP IFNGLALSMI FGILVSTLLT LVVIPVLYYS AFRKEHQQ