Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3343 |
Symbol | |
ID | 3568298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3597306 |
End bp | 3600512 |
Gene Length | 3207 bp |
Protein Length | 1068 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681815 |
Product | acriflavin resistance protein |
Protein accession | YP_286542 |
Protein GI | 71908955 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0450597 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG ATAACGGTCG CCTCGGTATT TCCGGGCGCA TTGCCGCCGC CTTCCAGTCT TCGCGGATGA CGCCCTTGCT GGCGTTGGTC GCCTTCCTGA TGGGGTTGTT TGCAACGCTG GTCACGCCGC GCGAAGAAGA GCCACAGATC GATGTGACCA TGGCCGACGT GCTGGTCGCC TTTCCCGGTG CTTCGGCCAA GGATGTCGAG AACCTGGTCG CACGGCCGGG CGAGCAGGTG CTGTCGCGCC TGCATGGCGT TGAACATGTC TATTCGATGT CGCGTCCCGG CATGGCGGTG ATTACCGTGC AGTTCGAGGT TGGCGTCAAA TACAACGACG CCGTCCTGCG TCTTTACGAT ACGGTGCATT CGAATCGTGA CTGGCTGGCG CCCAATCTCG GCGTGCAGGA GCCGGTGGTC AAGCCGCGTG GCATCGACGA CGTGCCTATC GTCTCGTTGA CTTTCTGGAC GCCGGACCCG GCCCGTTCTG CCTTCGACCT GCAGCAGGTG GCGCGCGCGG TCGAAATCGA ACTGAAGCGC ATCAAGGGGA CGCGCGATGT GTCCACCCTT GGTGGTCCCG ATCACGCCAT CCGCATCCTG ATGGATGCCG AGCGGATGAA CGCTTTTGGC GTCACGCCGC AGGATATTGC CGGCGCCCTG AAGGTTTCGA ATGCCTTGCA GTCCTCCGGC AGCCTGACTA CGGGCAATCG TGAGGTGCTG GTGCAGACCG GGACTTATCT CGAATCGGCC GCCGATGTGA AACGTCTGGT CGTCGCCGTC CGCGAGCGCA AACCGATCTA CATGAGCGAT GTGGCGATGG TTGAGGACGG TCCCGACCAG CCGAAGCGCT ATGCCTGGTT TGGCAACAAG TCTGGCGAAT TTCCGGCGGT GACCATCCAG CTGTCCAAGC AGCCGGGTGT CAACGCCGCC GATGTGGCGA GTGGCGCCAT TGCACGCATC GAGGCGTTGA AGAACACGGT TATTCCGGAG GGGGTCGAAG TGACCGTCAC CCGCAACTAC GGAGAAACGG CGACTGAAAA GGCGCAAAAG CTGATCGGAA AGCTGATCTT CGCCACCGCT TTCGTCGTGG CGCTGGTCTT CTTCGCGCTT GGCCGTCGTG AGGCGGTGAT CGTCGGCGTG GCCGTGACGC TGACCCTGGC GGCGACGCTG TTTGCTTCCT GGGCCTGGGG CTTCACGTTG AATCGCGTTT CGCTGTTCGC ACTGATTTTC TCGATCGGCA TCCTGGTTGA TGACGCCATT GTCGTGGTCG AGAACATCCA TCGCTGGCAG GGGCTGCATC CCGAGAAAAG TCTGCTCGAA ATCATTCCGG GCGCGGTCGA CGAAGTGGGC GGACCGACTA TTCTGGCGAC GCTGACCGTG ATCGCGGCGC TGCTGCCGAT GGCTTTCGTT TCAGGCCTGA TGGGGCCGTA CATGAGCCCG ATTCCGATCA ACTCGTCGAT GGGCATGGCC ATTTCGCTGG CCGTGGCCTT TATCGTGACG CCGTGGCTGG CCGCCAGGCT GATGAAGTCA CACGGCAATG CGCATGGCCA GCCGAAGCCG TCGAAGCTTG ATGCCAAACT TGACAGCACT TTCCGCAAGC TGCTGACCCC CTTCCTCGAT CCGCTGACCG GTGGCGCCGC CCGTGTCAAA CTGGCCATTG TCGTCGTGCT GCTGATCCTC GGTTCGGTCT CGCTGGCTTA CTTCCAGCTC GTCGTGCTGA AGATGCTGCC CTTCGACAAC AAGAGCGAAT TCCAGATTGT GGTCGACATG CCGGTCGGTA CGCCGCTGGA AGAAACGGCG CGGGTGCTGC ATGAGATTGG CGCCGAACTG GCCAGTGTGC CGGATGTCAT CAATTACCAG GCCTATGCCG GGACGGCCAG CCCGATCAAT TTCAATGGCC TGGTCCGCCA GTACTACCTG CGGGCGGTGC CGGAAAAGGG GGATCTTCAG GTCAATCTGG CCGACAAGCA TCATCGTTCG CGGCAGAGCC ACGAAATCGC CGTTTCGGTG CGCGAGCGCA TCGAGGCCAT TGGCAAGCGC AATGGTGGCG TCGCCAAGAT CGTCGAGGTG CCGCCAGGGC CGCCGGTGAT GTCGCCCATC GTTGCCGAGG TCTATGGGCC GGATTACGCC GGTCAGATGG CGGTTGGCAA GCAGGTGCGC GCCGCCTTTG AAAAGACGGC AGATGTTGTT GCGGTGGACG ACTATATCGA GGCCGATTCC CGCAAGTTCG TATTGCATGT CATGCAGAGC AAGGCGGCGC AGATGGGCGT GGCGCAGAGC GACATCGTCG AGGTGGTTGG CATGGGGCTG GCCGGGCAGG ACGTGACGCC AGCGCGCAAT ACCGAATCGA AGTTCGAGAT TCCGGTGCGG GTGACGCTGC CGGCCGAAAA ACAATCCACG CTTGATGCCT TGCTCAAGCT GCGTGTCCGT TCGCGTGACG GCCAGCTGGT GCCGGTTTCC GAGCTGGTCG AAGTGCGTGA CGTGGCCCGC GAGAAGGCGA TCTATCACAA GGATCTGCTA CCGGTCGTTT ATGTGGTCGG CGACATGGGC GGCAAGCTGG ATTCGCCGCT CTATGGCATG TTCGACATCC GCTCCAAAAT CAACGGTATG GCGCTCAAGG AAGGCGGCGC GCTGGGCGAA TGGTTCATTC GCCAGCCAGG CGATCCCTAC GCCGGCTACA GTGTGAAATG GGATGGCGAA TGGCAGGTCA CCTACGAAAC CTTCCGCGAC ATGGGCATTG CCTACGCGGT CGGCCTGGTC CTGATCTATC TGCTCGTGGT CGCTCACTTT GGCAGCTACC TCGTGCCGCT GATCATCATG GCGCCGATTC CGCTGACCAT CATCGGCGTC ATGCCCGGTC ACGCCTTGTT CGGCTCGCAA TTCACCGCCA CTTCGATGAT CGGCATGATC GCCCTGGCCG GCATCATCGT CCGCAATTCG ATCCTGCTCG TTGACTTCAT CAAGCAGCAG GTGGCGGCTG GCATCAACTT CCACGATGCG GTGATCCAGT CGGCGGCCGT CCGCGCCAAG CCTATCGCGC TGACGGCGCT GGCCGCCATG CTTGGCGCCC TGTTCATTCT CGATGACCCG ATCTTCAACG GACTGGCGTT GAGCATGATC TTCGGCATTC TCGTCTCCAC CCTGCTGACG CTGGTGGTGA TCCCGGTTCT TTATTACTCG GCTTTTCGCA AGGAGCATCA ACAATGA
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Protein sequence | MSHDNGRLGI SGRIAAAFQS SRMTPLLALV AFLMGLFATL VTPREEEPQI DVTMADVLVA FPGASAKDVE NLVARPGEQV LSRLHGVEHV YSMSRPGMAV ITVQFEVGVK YNDAVLRLYD TVHSNRDWLA PNLGVQEPVV KPRGIDDVPI VSLTFWTPDP ARSAFDLQQV ARAVEIELKR IKGTRDVSTL GGPDHAIRIL MDAERMNAFG VTPQDIAGAL KVSNALQSSG SLTTGNREVL VQTGTYLESA ADVKRLVVAV RERKPIYMSD VAMVEDGPDQ PKRYAWFGNK SGEFPAVTIQ LSKQPGVNAA DVASGAIARI EALKNTVIPE GVEVTVTRNY GETATEKAQK LIGKLIFATA FVVALVFFAL GRREAVIVGV AVTLTLAATL FASWAWGFTL NRVSLFALIF SIGILVDDAI VVVENIHRWQ GLHPEKSLLE IIPGAVDEVG GPTILATLTV IAALLPMAFV SGLMGPYMSP IPINSSMGMA ISLAVAFIVT PWLAARLMKS HGNAHGQPKP SKLDAKLDST FRKLLTPFLD PLTGGAARVK LAIVVVLLIL GSVSLAYFQL VVLKMLPFDN KSEFQIVVDM PVGTPLEETA RVLHEIGAEL ASVPDVINYQ AYAGTASPIN FNGLVRQYYL RAVPEKGDLQ VNLADKHHRS RQSHEIAVSV RERIEAIGKR NGGVAKIVEV PPGPPVMSPI VAEVYGPDYA GQMAVGKQVR AAFEKTADVV AVDDYIEADS RKFVLHVMQS KAAQMGVAQS DIVEVVGMGL AGQDVTPARN TESKFEIPVR VTLPAEKQST LDALLKLRVR SRDGQLVPVS ELVEVRDVAR EKAIYHKDLL PVVYVVGDMG GKLDSPLYGM FDIRSKINGM ALKEGGALGE WFIRQPGDPY AGYSVKWDGE WQVTYETFRD MGIAYAVGLV LIYLLVVAHF GSYLVPLIIM APIPLTIIGV MPGHALFGSQ FTATSMIGMI ALAGIIVRNS ILLVDFIKQQ VAAGINFHDA VIQSAAVRAK PIALTALAAM LGALFILDDP IFNGLALSMI FGILVSTLLT LVVIPVLYYS AFRKEHQQ
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