Gene Daro_3336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3336 
Symbol 
ID3566320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3590618 
End bp3591247 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID637681808 
Productclass II aldolase/adducin, N-terminal 
Protein accessionYP_286535 
Protein GI71908948 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR00760] L-ribulose-5-phosphate 4-epimerase 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000348459 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGACC TGCGCGCTCA ACTGATCAGC ACCGCCCGCG CCATGCAGCC GGCCGGCCTC 
AACCGCGGCA CCGCTGGCAA CGTCAGCGTG CGCAGTGGTG AGTGTTTCTA CATCACGCCG
ACCGGCATGG CCTACGAGGC CTTGCGCGAC GACGATATCC CGCTGATGGG GCTCGACGGA
TCGTACGTCG GCAGTCGCAA GCCCTCATCC GAATGGCGCT TCCACCGCGA CCTCTACGCC
AGCCGGCCGG AAGTCGGTGC CGTGCTGCAC GCCCATTCGC CCTTCGCCGT CAGCCTGGCC
TGCCTGCGCC TGGGCATCCC CTCCTTCCAT TACATGATCG CCCGCTTCGG CGGCGACAGC
ATCCGCTGCG CCCGCTACGC CGTTTTTGGC TCGGAATCGT TATCCGCCGC CGCCATGGCC
GCCATGGCCG AGCGCAAGGG CTGCCTGCTG GCCAACCACG GGATGCTGGT CGCCGGCCGC
GACCTCGCCG AAGCACTGGC CCTGGCCATC GAACTGGAAG AGCTGTGCGA GCAATACTGG
CGCGCCAGTC AGCTCGGCAG CCCGGTCTTG CTGTCGGCCG ATGAAATGAC CGAGGTGCTC
GACAAGTTCA AGGGCTACGG TCAGCAATGA
 
Protein sequence
MADLRAQLIS TARAMQPAGL NRGTAGNVSV RSGECFYITP TGMAYEALRD DDIPLMGLDG 
SYVGSRKPSS EWRFHRDLYA SRPEVGAVLH AHSPFAVSLA CLRLGIPSFH YMIARFGGDS
IRCARYAVFG SESLSAAAMA AMAERKGCLL ANHGMLVAGR DLAEALALAI ELEELCEQYW
RASQLGSPVL LSADEMTEVL DKFKGYGQQ