Gene Daro_3325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3325 
Symbol 
ID3566309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3575387 
End bp3576493 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content62% 
IMG OID637681797 
Productradical SAM family protein 
Protein accessionYP_286524 
Protein GI71908937 
COG category[L] Replication, recombination and repair 
COG ID[COG1533] DNA repair photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones63 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000113455 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGG AAGATTTCGA CCTCTCCCCT TCTGCGGAAA TTCCGGCCAC GCCGATTAAG 
GGGCGCGGCG CGGTAAGTAA TGTCGACCAC CGCTTCAGCA CCGACACCCG GCAAAACATG
GCCGACGGCT GGGAAGCATC TGAACCCGCC TTGCCGCAAA CCCGCCTGCT GGTCGACCGT
GCGAAAAGCA TCATCAGCCG AAATGACTCA CCCGATCTCG GTTTCGACCA ATCGCTGAAT
CCCTACCGGG GGTGCGAGCA CGGCTGCATC TACTGCTATG CCCGACCGAC CCATGCCTAT
CTGGGCCTGT CGCCGGGGCT GGATTTCGAA ACGCAAATTT TCGCCAAGCC GGATGCCCCC
CGCCTGCTGC GTGAAGCACT GGCCAAGCCC GGCTACGTAT GTTCGACCAT CGCCCTCGGT
ACGGCAACCG ATGCCTACCA GCCTTTCGAG CGCCAGGAGG GCCTGACTCG CGCCGTGCTG
GAAGTACTAC TCGAAACGCG GCACCCGGTC AGCGTGGTGA CCAAGTCCTC GCTGATCATT
CGCGACCTCG ACCTGTGGAC TGAACTGGCG CAGCAAAATC TGGCCCATAT CGCCATTTCG
CTGACCACTA CGAACGGACC GCTGGCGCGC CAACTCGAAC CACGAGCCAG TGCCCCGCAC
GCCCGGCTTG AAGCGATGGC AAAACTGAGC GCTGCCGGCA TACCGGTTTC GGCATTCATT
GCCCCGCTGA TCCCCGGCAT CAACGATCAC GAACTGGAAA AATTGCTGGG CGCCGCCCGC
GAACATGGCG CCAGCCATGC CAGCTACACG CTGCTCCGCC TGCCCCACGA GGTGGCCGGA
CTATTCCGGG AATGGCTGGA ATGGCACGCC CCCCAGAAGG CGGCGCGGGT CATGTCGGTG
CTTTACGATC TGCGCGGACA GCGGGCCAAT GACCCGAATT TCGGCAGCCG GATGACCGGC
CTCGGTCACT TCGCCAAACT GATCCGCCAG CGTTTCGAAC TGGCTTGCCG ACGCCTCGGA
CTGAGCGAGT CCCCACCTGC CCTCGACACC TCGCAATTCA TCCGAGGCGC CAGGATAGAG
CGGAACGGTC AGCTCGATTT ATTCTGA
 
Protein sequence
MSMEDFDLSP SAEIPATPIK GRGAVSNVDH RFSTDTRQNM ADGWEASEPA LPQTRLLVDR 
AKSIISRNDS PDLGFDQSLN PYRGCEHGCI YCYARPTHAY LGLSPGLDFE TQIFAKPDAP
RLLREALAKP GYVCSTIALG TATDAYQPFE RQEGLTRAVL EVLLETRHPV SVVTKSSLII
RDLDLWTELA QQNLAHIAIS LTTTNGPLAR QLEPRASAPH ARLEAMAKLS AAGIPVSAFI
APLIPGINDH ELEKLLGAAR EHGASHASYT LLRLPHEVAG LFREWLEWHA PQKAARVMSV
LYDLRGQRAN DPNFGSRMTG LGHFAKLIRQ RFELACRRLG LSESPPALDT SQFIRGARIE
RNGQLDLF