| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3306 |
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| Symbol | |
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| ID | 3566486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3555203 |
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| End bp | 3556513 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681779 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_286506 |
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| Protein GI | 71908919 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.148376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.12789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATC GTCTTCGTCC TGCTTTCGTC ATCATCACGC TGGCTCTGGC CTGTTCTTCT
GCCCTGGCCG CCAAGCCTGC CAAGTCGGCA AAGCCTGCTG CAAAGCCGGT TCACGCTCCG
GCGCCTGCTG CCGACTTCGA GTTGGCCCAT AATCTTGGCC CGGACGGTGA AGAGCAACTG
CAGGCAGTGG TTGATCGTTT CAACAAGGAA AACGGTGGCA ACCTGAAATT GGCACGCCTG
GAAAAGGGTG AAAAGCCGGC CGGGCTCAAC CTGATCCGTC GCTATGACAT GAGCGACGTA
CTGGTTCAAC CAAAGGCCTT CGTGCCGCTG TACGAGATGA TGACCAAGGC AGGGCAACCG
CTTCAGGTTG GCGAGTTGTC GGCGGATCTG AAGTCAGGTG CGGTCGATGC CAAGGGACGC
CTGGTCGCTT TGCCGCTGAT CTATTCGACG CCGGTTCTGT TCTACAACAA GAATGCTTTC
CGCAAGGCGA AGCTGGATCC CGAGCAGCCG CCGAAGACCT GGTTTGAAAT GCAGGGCGTA
CTCGACAAGC TGCAGGACGC TGGTTACACC TGTCCTTACA CATCGTCGTG GCCAGTCTGG
GTGCACATTG ATAACGTCAG TGCCGTGTCT GGTGTGCCGG CAGTCAGCGA CAAGGGCACG
CTGAGCTTCA ACGGCCTGCC GCAGGTCAAG CACGTGGCGA TGATGGCGAC CTGGACCAAG
GCCAATTACT TCAAGCTGTT CGGTCGTCGC AACGAAGCCA GCACCAAGTT CCATGACGGC
GAATGCGCAA TGATCACGAC CGATTCGCGC GAACATATTG ATTTCCGTGA TGCCAAGGGC
GTCGAACTAG GCGTTGCCCC GCTGCCCTAT CACGATGATG TTTACGGCGG CCGCCAGAAT
TCGCTGGCCG ATGGGGCGTC GCTGTGGGTT GGTGCGGGCA AGTCGCCTGC GGAGTACAAG
CAGGCAGCAA AATTCGTCTC CTTCCTGCTT TCGCCGGAAA TGCAGATCGA GATGGTGCGC
GTCTATGGCG GGCTGCCGCT GACCGCAGCC GCCCGTGCCG CAGCCCGCAG CAAGCTGCTG
CAGGATGGAG ACAAGACGCT GGAAGTTGCT TATGCCTCGA TGAAAGGCAA GGGGGCTTCG
CATGTTCCCC ATGTGTCCGA TGCCGACCCG GTGCGCATCC TGACCAATGA GGAACTGGAG
GCCGTGTGGT CCGACAAGAA GCCCGCCAAG GCTGCACTGG ATACGGCGGT TTCCCGCGGT
AACGCCATCA TGGCAGCCAA GCCGGCCCTG AAGAAGGCGC AGCCCTTCTA A
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| Protein sequence | MSHRLRPAFV IITLALACSS ALAAKPAKSA KPAAKPVHAP APAADFELAH NLGPDGEEQL
QAVVDRFNKE NGGNLKLARL EKGEKPAGLN LIRRYDMSDV LVQPKAFVPL YEMMTKAGQP
LQVGELSADL KSGAVDAKGR LVALPLIYST PVLFYNKNAF RKAKLDPEQP PKTWFEMQGV
LDKLQDAGYT CPYTSSWPVW VHIDNVSAVS GVPAVSDKGT LSFNGLPQVK HVAMMATWTK
ANYFKLFGRR NEASTKFHDG ECAMITTDSR EHIDFRDAKG VELGVAPLPY HDDVYGGRQN
SLADGASLWV GAGKSPAEYK QAAKFVSFLL SPEMQIEMVR VYGGLPLTAA ARAAARSKLL
QDGDKTLEVA YASMKGKGAS HVPHVSDADP VRILTNEELE AVWSDKKPAK AALDTAVSRG
NAIMAAKPAL KKAQPF
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