Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3305 |
Symbol | ugpQ |
ID | 3566485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3554459 |
End bp | 3555202 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637681778 |
Product | cytoplasmic glycerophosphodiester phosphodiesterase |
Protein accession | YP_286505 |
Protein GI | 71908918 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.233023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.109896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATC CGCTGCCGCG CTGGTTTGCC CATCGCGGTG GCGGCTCGCT GGCACCGGAG AATACGCTGG CCGGTATCCG GCTGGCGGCG CGCTTGGGGT ACAAGGCCGT CGAATTTGAC GTGATGCTTT CCGGGGACGG TACGCCTGTA CTGATTCACG ATGAAACGCT GGAGCGGACG ACCAACGGCA GCGGGCGGGT TTGCGAGGCC ACTGATTCAC AGTTGTTTCG GCTTGATGCC GGTAACGGCG AGCCCATTCC CCGGTTTTCC GAAGCGGTGG CGCTGTGTCG GGAATATGGC CTGCTGGCCA ATGTCGAGAT CAAGCCGGCA ACCGGCTTTG AGCGCCAGAC GGCGGAGACG GTTGCGCTCA TGACAAAGCA ACTCTGGCAG GGCGCTGCAA TTCAACCGCT GATTTCCTCG TTTTCACTGG AAGCCATCGA GGTGGCACGT GATCTGGCAC CGAATATCCC CCGTGGCTTG TTGTTCGAGT CGGTGCCGGA TGACTGGTTG CAGGCGATGT CTCGCTGGCA GGCGCTGACG CTGCATTGTT CAGCCAGCCA TGTCAGTGAC CAGGTGCTGG CCGAAGCGTG CGAGTGTGGT GTGCCGGTGC TTTGTTACAC GGTCAACCAG ACGGAGCAGG CAAAAGCGCT TTTCGAGCGT GGGGTTAGTG CTGTATTCAC TGACCGTCTT GATTTGTTTT CATCAGAAAC AAGTGCTTAC AAAGGCTTGC AATTAGGCGG CTGA
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Protein sequence | MKHPLPRWFA HRGGGSLAPE NTLAGIRLAA RLGYKAVEFD VMLSGDGTPV LIHDETLERT TNGSGRVCEA TDSQLFRLDA GNGEPIPRFS EAVALCREYG LLANVEIKPA TGFERQTAET VALMTKQLWQ GAAIQPLISS FSLEAIEVAR DLAPNIPRGL LFESVPDDWL QAMSRWQALT LHCSASHVSD QVLAEACECG VPVLCYTVNQ TEQAKALFER GVSAVFTDRL DLFSSETSAY KGLQLGG
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