| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3281 |
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| Symbol | secF |
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| ID | 3567148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3532540 |
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| End bp | 3533484 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637681754 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_286481 |
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| Protein GI | 71908894 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.0339451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTTT TCCGCATCCA CAAAGACATT CCCTTCATGC GCCATGCGCT GAAGTTCAAT
GTCATTTCGC TGCTCACCTT CATTCTGGCC GTGGTTTTTC TCTTTACCAA GGGCCTGCAC
CTGTCCGTCG AATTCACCGG CGGCACGCTG ATCGAAACCC ACTACGAGCA GGCAGCAGAT
CTCGAAAAGA TCCGTGGCGC CCTTGGCAAG TCGGGCTTCA GCGACTTTTC CGTGCAGAAC
TTCGGTTCAT CTCAGGATGT CATGATCCGT CTGCCGCTGA AGAGCGAGCA GAACACCAAC
CAGATCGGTG AGTCGGTCAT GAAGGCGCTC GAAGCCGAAG CGCCGGGCTC GCAGTTGCGC
CGCGTCGAGT TCGTCGGTCC GCAGGTCGGC AAGGAACTGG CTGAAAACGG TGCCATGGCT
CTACTGCTGG TCGTCATTGG TATCGTGATC TACCTGGCCT TCCGCTTCGA ATGGCGCTTC
TCGGTCTCGG CCATCATCGC CAACCTGCAC GACGTGGTGA TCATCCTTGG CTTCTTCGCC
TTCTTCCAGT GGGAATTCTC GCTGTCGGTA CTGGCCGCCG TGCTCGCCGT ACTGGGCTAC
TCGGTCAATG AATCGGTCGT CGTGTTCGAC CGGGTCCGTG AAACCTTCAA GAAGGTGCGC
GGACTGAGCA CCCCGGAAGT ACTCGACCAT GCCATCACCA GCACGATCAG CCGGACCATC
ATCACCCACG GCTGTACCCA GCTGATGGTG CTGTCGATGC TGATCTTCGG CGGCGAGACC
CTGCACTACT TCGCCATGGC GCTGACCATC GGCATCTGCT TCGGCATTTA CTCCTCGGTG
CTGGTCGCCA GCCCGCTGGT CATGTGGCTG GGTGTTTCCC GTGAGCAGTT CATCAAGGTG
AAGAAGGTCG TCGAGGGTGC TAACGAAGAC GGCGCCGTCG TCTGA
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| Protein sequence | MEFFRIHKDI PFMRHALKFN VISLLTFILA VVFLFTKGLH LSVEFTGGTL IETHYEQAAD
LEKIRGALGK SGFSDFSVQN FGSSQDVMIR LPLKSEQNTN QIGESVMKAL EAEAPGSQLR
RVEFVGPQVG KELAENGAMA LLLVVIGIVI YLAFRFEWRF SVSAIIANLH DVVIILGFFA
FFQWEFSLSV LAAVLAVLGY SVNESVVVFD RVRETFKKVR GLSTPEVLDH AITSTISRTI
ITHGCTQLMV LSMLIFGGET LHYFAMALTI GICFGIYSSV LVASPLVMWL GVSREQFIKV
KKVVEGANED GAVV
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