Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3278 |
Symbol | tgt |
ID | 3566105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3529122 |
End bp | 3530231 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681751 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_286478 |
Protein GI | 71908891 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.275264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTTG ATCTCCTGAA AACCGATGGT GTCGCCCGCC GCGGGACCCT GACACTGGCC CACGGGGTCA TCCAGACGCC CGTCTTCATG CCGGTCGGCA CCTACGGCAC GGTCAAGGCA ATGACGCCAC AGTCGCTGAA CGACATCGGC GCCCAGATTT GTCTCGGCAA CACTTTCCAT CTCTGGCTGC GGCCGGGACT GGAGGTCATC GCCGCCCACA AAGGCCTGCA CGACTTCATG AACTGGCAGA AGCCGATCCT GACCGATTCC GGCGGCTTCC AGGTCTTCTC GCTCGGCGCC ATGCGCAAGA TCACCGAGGA AGGGGTCAAG TTCTCGTCGC CGCACGATGG CGCCAAGCTC TTCCTGACGC CGGAAATCTC GATGCAGATC CAGAAGGTGC TGAATTCCGA CATCGTGATG ATCTTCGACG AATGCACGCC CTACCCGGCG ACGCATGAAG AGGCGGCCAA GTCGATGCGA ATGAGCATGC GCTGGGCCCA ACGTAGTCGT GATGAGCATA ACAAGCTGGA AAACAGCAAC GCGCTGTTCG GCATCGTCCA AGGCGGCATG CACGAAGACC TGCGCGATGA ATCGGTGGCC GGTCTGTGCG ACATCGGCTT CGATGGCATG GCCATCGGCG GCCTGTCGGT CGGCGAACCG AAGGAAGACA TGGCGCGCAT CCTCGCCCAT ACCGCGCCAC AACTACCGAC GCACAAGCCA CGCTACCTGA TGGGCGTCGG CACACCGGAA GATCTGGTCT ATTCGGTCAG CGCCGGCATC GACATGTTCG ATTGCGTGAT GCCGACGCGC AACGCCCGCA ACGGCCACCT GTTCACCCGT TTCGGCGACG TCAAGATCAA GAATGCACGC TACAAGTTGG ACACCGGCCC GCTCGATTCG TCCTGCTCCT GCTATACCTG CACCAATTTC ACCCGTGCCT ACCTGCATCA CCTGTTCCGC AACGGCGAAA TTCTCGGCGG CATGCTGAAC ACCATCCACA ACCTGCATTT CTATCAGACC ATCATGGCCG AAATGCGCAC GGCCATTGAG GTGGAACACT TCACCGAATG GGCTGCCGGC TTTGCCCGCG ACCGTTCCTC GGGCCAGTGA
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Protein sequence | MQFDLLKTDG VARRGTLTLA HGVIQTPVFM PVGTYGTVKA MTPQSLNDIG AQICLGNTFH LWLRPGLEVI AAHKGLHDFM NWQKPILTDS GGFQVFSLGA MRKITEEGVK FSSPHDGAKL FLTPEISMQI QKVLNSDIVM IFDECTPYPA THEEAAKSMR MSMRWAQRSR DEHNKLENSN ALFGIVQGGM HEDLRDESVA GLCDIGFDGM AIGGLSVGEP KEDMARILAH TAPQLPTHKP RYLMGVGTPE DLVYSVSAGI DMFDCVMPTR NARNGHLFTR FGDVKIKNAR YKLDTGPLDS SCSCYTCTNF TRAYLHHLFR NGEILGGMLN TIHNLHFYQT IMAEMRTAIE VEHFTEWAAG FARDRSSGQ
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