| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3274 |
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| Symbol | |
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| ID | 3566100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3524795 |
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| End bp | 3526480 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637681746 |
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| Product | cytochrome d1, heme region |
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| Protein accession | YP_286474 |
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| Protein GI | 71908887 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 0.825394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA ACGTAGTGGG GATGCTTGCA CTTAGCGCCA TGGCTTTTGC CATGGGTTCT
GCCTTCGCTC AGGAAACTGC CAAGGCGGCT CCGGAAATGA CGGCTGCCGA AAAAGAACAG
GCCAAGAAGA TTTATTTTGA ACGTTGTGCT GGTTGTCACG GTGTGCTGCG CAAGGGCGCT
ACCGGCAAGA ACCTTGAGCC GCACTGGACG AAGAAGGACA AGGACGGCAA CGTTACCGAA
GGCGGTACGC TGAAGCTTGG GCAGCAGCGT CTGGAAAAAA TTATCGGTTA CGGTACCGAT
GGCGGCATGG TCAACTTCGA CGACATCCTG ACCAAGGAAG AGCTGACCCT GATGGCCAAG
TACATCCAGA ACACGCCGGA TGTGCCACCC GAGTACAGCT TCAAGGATAC GATGGATTCC
TGGAAGGTCA TGGTGCCGGT CGACAAGCGC CCGACCAAGC AGATGAACAA GTACAACCTG
AAGAACATGT TCTCCGTCAC CCTGCGTGAC ACTGGCGAAG TGGCGCTGAT CGATGGCGAT
ACCAAGGAAA TCCGCAGCAT CGTCAAGACT GGTTATGCCG TTCATATCTC CCGTCTTTCT
GCTTCCGGTC GTTACGTTTA TGTGATCGGT CGCGATGGTC GCTTGTCGTT GATCGACCTG
TGGATGGAAC AGCCGGCGGT TGTGGCAGAA GTCAAGATCG GTTTCGATGC CCGCTCGGTC
GATACTTCCA AGTTCAAGGG CTTTGAAGAC AAGTACGCCG TGGCTGGTTC CTACTGGCCG
CCCCAGTACG TGATCATGGA TGGCGATACG CTGAAGCCGC GCAAGGTCGT TTCCACCCGT
GGCATGACCG TTGATGGCGA ATACCATCCG GAACCGCGCG TGGCTTCCAT CGTCGCGTCC
TTCACCAAGC CGGAATGGGT TATCAACATC AAGGAAACCG GCCAGATCCT GTTGGTCGAT
TACTCTGATA TCGAAAATCT GAAGACGACG ACCATCGGTT CCGCCAAGTT CCTGCATGAC
GGTGGCTGGG ATGCTTCCAA GCGCTACTTC CTGGTGGCTG CCAATGCGTC CAACAAGATC
GCGGCGGTTG ACACCAAGAC CGGCAAACTG GCCGCTCTGG TCGATGTCGC CAAGATCCCG
CACCCGGGTC GTGGCGCCAA CTTCACCCAT CCGAAATTTG GTCCGGTATG GACCACCGGT
CACCTCGGTG CCGATGTCCT GACCCTGATC AGCACACCTT CGGATAAGAA GTCGGATGCC
AAGTTCAAGG AATACAACTG GAAGGTTGTT CAGGAAGTGA AGCACGTTCC GGGCAATTTG
TTCGTCAAGA CCCATCCGAA GTCCAAGCAC CTGTGGGCTG ACTCTCCGCA GAATCCGGAA
AAGGAACTGG CTGAATCCGT TGCCATCTGG GATGTGGCTG ACCTGTCGAA GCCGGTCAAG
GTTATCAACG TGGCCAAGGA TTCCGGCCTG CCGGTGACCA AGGCGACTCG CCGTGCCGTT
CATCCGGAAT ACAGCGCTGA TGGCAAGGAA GTCTGGATCT CCCTGTGGGG CGGCAAGACC
GACCAGTCAG CCATCGTGGT TTATGACGAT GCGACGCTGA CCCTGAAGAA GGTGATCACC
GATCCGAAGA TGATCACCCC GACCGGCAAG TTCAACGTCT TCAACACCCA GCACGACATC
TATTGA
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| Protein sequence | MKKNVVGMLA LSAMAFAMGS AFAQETAKAA PEMTAAEKEQ AKKIYFERCA GCHGVLRKGA
TGKNLEPHWT KKDKDGNVTE GGTLKLGQQR LEKIIGYGTD GGMVNFDDIL TKEELTLMAK
YIQNTPDVPP EYSFKDTMDS WKVMVPVDKR PTKQMNKYNL KNMFSVTLRD TGEVALIDGD
TKEIRSIVKT GYAVHISRLS ASGRYVYVIG RDGRLSLIDL WMEQPAVVAE VKIGFDARSV
DTSKFKGFED KYAVAGSYWP PQYVIMDGDT LKPRKVVSTR GMTVDGEYHP EPRVASIVAS
FTKPEWVINI KETGQILLVD YSDIENLKTT TIGSAKFLHD GGWDASKRYF LVAANASNKI
AAVDTKTGKL AALVDVAKIP HPGRGANFTH PKFGPVWTTG HLGADVLTLI STPSDKKSDA
KFKEYNWKVV QEVKHVPGNL FVKTHPKSKH LWADSPQNPE KELAESVAIW DVADLSKPVK
VINVAKDSGL PVTKATRRAV HPEYSADGKE VWISLWGGKT DQSAIVVYDD ATLTLKKVIT
DPKMITPTGK FNVFNTQHDI Y
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