Gene Daro_3262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3262 
Symbol 
ID3566401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3510958 
End bp3513252 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content62% 
IMG OID637681734 
ProductABC transporter, transmembrane region:ABC transporter related 
Protein accessionYP_286462 
Protein GI71908875 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA AACCACTGAA TTCAGCCAGC ACCGAGCTGG CGCTCCCCGG CCATTGGACT 
GCCGCAATCG AGCCCAGGCT GACCTCCGGC GAAACAACGC AGGCATGGCT GGAAATCGAC
CTCGATAATC GCCTGAAATT TTCCAGCGGC CTGGTCCTGG TGACCAATCG CCGCCTGCTT
GCCCTGCCGG CGGGCGAGAC TGACTGGCAG GAATGGCCAC TGCGTGGCGG CCTGACGCTG
AACCATCACG ACCATGCCGG GGTCGGCGCT CTCGAACTGA TCGACGAACA GGGCCAACTG
GCCACCTGGC GTTACACGCT GGCCAAGAAC CTGGCTGCCT TGCGCGTCAT CAGCGAATTT
GACCTGAACC GCGACAGCAT CGTGTCCGGC CAACCTGTGC AGCGGACCAC CGAAGACTGC
TGCCCAAAAT GCAAGGCACC GTTGCCGCCG GGTGAAGATG AGTGCCCGAT CTGCAACCGT
GAAGCCACCG TCGCCCCGTC CACCTGGACA CTTTTCCGCC TCTGGCGCTT CGCCCGCCCC
TATCGCTGGC AACTGCTCAC CGGCTTCCTG CTGACGCTGG CCTCGACCGC GGCCCAACTG
GTCCCGCCCT ACCTGACCAT GCCGCTGATG GACAACGTGC TGATCCCGTT CCAGAACGGC
AAGCCGATCG ACTGGCCACT GGTCTCGATG TATCTCGGTG GTCTGTTCGG CGCCGCCATG
CTGGCCTGGG TGCTCGGCTG GATTCGCACC TACATCCTGT CGCTGGTTTC CGAACGGATG
GGCCGCGACC TGCGCACCAC CACCTATGAA CACCTGATGG GACTCTCCCT GGAGTATTTC
GGCGGCAAGC GCACCGGCGA CCTGATGGCG CGGATCGGCA ACGAAACCGA CCGCATCAAC
ATCTTCCTAT CGCTCGACCT GCTCAATTTC GCCACCGACG TGCTGATGAT CACGATGACC
GCCGTCATCC TGTTCAGCAT CAACCCCTGG TTGGCCCTGG TCACCTTGCT GCCGCTGCCG
ATCATCGGCT GGATGATTCA CTTCGTCCGT GAAAAACTGC GTACCGGCTT CGAGAAGATC
GACCGCGTCT GGGCTGAAGT GACCAACGTG CTGGCCGACA CCATTCCCGG CATTCGCGTC
GTCAAGGCCT TTGCCCAGGA AAAGCGCGAA AGCGAACGTT TCCGCGCCGC CAACGAACAC
AACCTGCAGA TGAACGACAA GCTGAACAAG ACCTGGTCCT TGTTCACGCC GACCGTCACT
CTGCTCACCG AAGTCGGCCT GCTGGTCGTC TGGGTCTTTG GCATTTGGCA GATTTCCAAA
GGTAACAGTT CAGTCGGCGT GCTGACTGCC TTCCTCGCCT ACATCGGCCG CTTCTACACC
CGTCTCGACT CGATGAGCCG CATCGTTTCG GCCACCCAGC GTGCGGCCTC CAGCACCAAG
CGCATTTTCG ACATTCTCGA CCATGTCTCC AGCGTTCCTG AACCGACCAG CCCGGTTCAC
CTGACCGGTG TCACCGGCCA GATCGAACTG AAGAAGGCTG GCTTCCGCTA TGGCACCCGT
GCCGTCACGC GCGACGTCGA CCTGATCATC CAGCCCGGCG AAATGATCGG CCTGGTTGGC
CATAGCGGCT CCGGAAAATC GACGCTGGTC AATCTGATCT GTCGCTTCTA TGACGTTTCC
GAAGGCCAGG TACTGATCGA CGGCGTCGAT GTTCGCTCGG TACCGGTCGC CGAATTCCGC
AGTCACATCG GCCTCGTCTT GCAGGAGCCC TTCCTGTTCT TCGGCACGAT TGCCGACAAC
ATTGCCTACG GCAAGCCGAA CGCGACGCGC CAGGAAATCA TTGCCGCCGC CCGCGCCGCC
CACGCCCACG AGTTCATCCT GCGCCTGCAG CATGGCTATG ACTCGCTGGT TGGCGAGCGA
GGCCAGGGCC TGTCCGGCGG CGAGCGTCAG CGCATCTCGA TTGCCCGCGC CCTACTGATT
GACCCACGTA TCCTGATTCT CGACGAGGCC ACTTCGGCGG TCGACACCGA GACCGAGAAG
GAAATTCAGA AGGCACTCGA CAATCTGGTC AAGGGCCGCA CCACCATTGC CATTGCCCAC
CGTCTGAGCA CGCTGCGCAA GGCCGACCGG CTGGTCGTCA TGGATCGCGG CAAGATTGTC
GAGGTGGGCA ACCACGACGA ACTGATGGCC AAGGAAGGCC ATTACTTCAA GCTCTATATG
GCCCAGGCCC GCAACGTCGA CACCGAACCG ATGTTGCCGC GTACGACCAG CCTGCCCAAG
ACTCACGCGG AATAA
 
Protein sequence
MSAKPLNSAS TELALPGHWT AAIEPRLTSG ETTQAWLEID LDNRLKFSSG LVLVTNRRLL 
ALPAGETDWQ EWPLRGGLTL NHHDHAGVGA LELIDEQGQL ATWRYTLAKN LAALRVISEF
DLNRDSIVSG QPVQRTTEDC CPKCKAPLPP GEDECPICNR EATVAPSTWT LFRLWRFARP
YRWQLLTGFL LTLASTAAQL VPPYLTMPLM DNVLIPFQNG KPIDWPLVSM YLGGLFGAAM
LAWVLGWIRT YILSLVSERM GRDLRTTTYE HLMGLSLEYF GGKRTGDLMA RIGNETDRIN
IFLSLDLLNF ATDVLMITMT AVILFSINPW LALVTLLPLP IIGWMIHFVR EKLRTGFEKI
DRVWAEVTNV LADTIPGIRV VKAFAQEKRE SERFRAANEH NLQMNDKLNK TWSLFTPTVT
LLTEVGLLVV WVFGIWQISK GNSSVGVLTA FLAYIGRFYT RLDSMSRIVS ATQRAASSTK
RIFDILDHVS SVPEPTSPVH LTGVTGQIEL KKAGFRYGTR AVTRDVDLII QPGEMIGLVG
HSGSGKSTLV NLICRFYDVS EGQVLIDGVD VRSVPVAEFR SHIGLVLQEP FLFFGTIADN
IAYGKPNATR QEIIAAARAA HAHEFILRLQ HGYDSLVGER GQGLSGGERQ RISIARALLI
DPRILILDEA TSAVDTETEK EIQKALDNLV KGRTTIAIAH RLSTLRKADR LVVMDRGKIV
EVGNHDELMA KEGHYFKLYM AQARNVDTEP MLPRTTSLPK THAE