| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3261 |
|---|
| Symbol | |
|---|
| ID | 3566400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3509692 |
|---|
| End bp | 3510831 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637681733 |
|---|
| Product | radical SAM family protein |
|---|
| Protein accession | YP_286461 |
|---|
| Protein GI | 71908874 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 57 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGCA TTTCACAATA CATGCAGGAA ATCGCCGAGC CAACGCCGCT TGGGCCAAAA
CGCAACCCGC CCGGTCCGGT GGTGATCTGG AACCTGATCC GGCGCTGCAA TCTGACCTGC
AAGCATTGCT ATTCGATTTC CGCCGATACG AATTTCCCTG GCGAGTTGAG CACCGAGCAG
GTTTTCACGG TGATGGATGA CCTCAAGGGC TTCAAGGTGC CGGTGCTGAT CCTCTCCGGC
GGTGAGCCGC TGCTGCGACC AGATATCTAC GACATCGCCA AGCGTGCCAA GGCCAAGGGG
TTTTACGTTG GCCTGTCGTC AAACGGCACG CTGATTGACG AAAGCAACAT CGGCAAGATC
GCCGAGTGCG ATTTCAACTA CGTCGGCGTT TCGCTGGATG GCATTCGCGA AACGCACGAC
AAGTTCCGGC GTATGGATGG CGCTTTCGAG GCCTCGCTGA AAGGCATCCG CCTGTGTCGT
GATCTGGGGC TGAAAATAGG CGTCCGCTTC ACGATGACCC AGGACAACGC CCACGATCTG
TCCGGTCTGC TCAAGCTGGT CGAGGACGAA GGCATCGACC GCTTCTATTT CTCACACCTC
AATTACGCCG GGCGCGGCAA CAAGAACCGC AAGGACGACG CCCAGCACAA GCTGACCCGC
TGGGCGATGG ACCTGTTGTT CGATACCTGC TGGGGTTACA ACCAGCGCGG GTTGAACAAG
GAATTCACGA CCGGTAACAA CGATGCCGAC GGTGTCTATT TCCTGCACTG GGTGCGCCGG
CGTTTCCCGG ACAAGGCGGC GCATGTCGAA GCCAAACTGC GCCAGTGGGG CGGCAACTCG
TCGGGCGTCA ATGTCGCCAA CATCGACAAC CTCGGTAATG TGCATCCGGA CACCATGTGG
TGGCACCACA ATCTGGGCAA CGTCAAGGAT CGGCCATTTT CGGAGATCTG GCCGGATACC
TCGGATGAAC TGATGGCCGG GTTGAAGCAG CACCCGCGGG CCGTCAAGGG GCGCTGTGGT
ACCTGTGCCT ACCTGCAAAT TTGCAACGGT AATACCCGCG TTCGTGCCCA GCAAATGACT
GGCGATGCCT GGGCGGAAGA TCCCGGTTGC TACCTTTCCG ACGACGAGAT TGCAGCATGA
|
|---|
| Protein sequence | MFRISQYMQE IAEPTPLGPK RNPPGPVVIW NLIRRCNLTC KHCYSISADT NFPGELSTEQ
VFTVMDDLKG FKVPVLILSG GEPLLRPDIY DIAKRAKAKG FYVGLSSNGT LIDESNIGKI
AECDFNYVGV SLDGIRETHD KFRRMDGAFE ASLKGIRLCR DLGLKIGVRF TMTQDNAHDL
SGLLKLVEDE GIDRFYFSHL NYAGRGNKNR KDDAQHKLTR WAMDLLFDTC WGYNQRGLNK
EFTTGNNDAD GVYFLHWVRR RFPDKAAHVE AKLRQWGGNS SGVNVANIDN LGNVHPDTMW
WHHNLGNVKD RPFSEIWPDT SDELMAGLKQ HPRAVKGRCG TCAYLQICNG NTRVRAQQMT
GDAWAEDPGC YLSDDEIAA
|
|---|
| |