| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3256 |
|---|
| Symbol | |
|---|
| ID | 3566395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3503998 |
|---|
| End bp | 3505242 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637681728 |
|---|
| Product | nucleoside recognition |
|---|
| Protein accession | YP_286456 |
|---|
| Protein GI | 71908869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTCAATC GAATCTGGGT CGCCTTCATC CTCGTCGGCT TTGTCGCGGC GGTGGCGCAG
TTGCTGCAAG GTGATCTCGA CATCTTCACG CGGGTGTTGA CCGGATTATT CGATACGGCC
AGGACGGGTT TCGATATTTC GCTCGGCCTG GTCGGCGTGA TGAGCCTCTG GCTCGGGGTG
ATGAAGATCG GCGAGCGGGG CGGGCTGATC CAGTTGTTCG GGCGCCTGGT GGGGCCGTTC
TTCCGCCGCA TCTTTCCTGA TATTCCGACC GGTCATCCGG CTGGCGGCAG CATCGTGATG
AATTTCAGCG CCAACATTCT CGGCCTCGAC AATGCGGCGA CGCCGCTCGG CCTGAAGGCG
ATGCGCGAAC TGCAGGAGAT CAACCCGCAG CCCGACACGG CCAGCAACCC GATGATCATG
TTCCTGGTGC TCAACACGGC CGGCATCACG CTGATCCCGA CGTCGGTGAT CGCCATTCGG
CAGAGCATTG CGCTCAAGCA GGGGCTGGTC GGCTTCAACG CGGCCGATAT CTTTCTGCCG
ACGCTGCTCG GCACCTTCGT CTCGTTCTGC GCCGGGCTGG TAGCCGTTGC CATCTGGCAG
CGTATCAACC TGTTCTGCAA GCCGGTGCTC GCCTTTTTTG CCGGATTCGC CGCGTTGATG
GGTGGCCTGT ACTGGTGGCT GGGCGGCATG CCGGCAGAGC AGATGGCGCA GATGATCGGG
CTGCTCGGCA GCGGCATCAT CGTCGCTATC ATCGCGCTCT TCGTTGCCGT CGCCGCCTGG
CGTGGCATCG ACGTCTACGA GAGCTTCATC GAGGGGGCCA AGGAAGGCTT CGGCGTTGCC
GTGCAGATCA TTCCCTACCT GATTGCCATG CTGGTCGCCA TCTCGGTCTT TCGGACGACC
GGCGGCATGG ACTACCTGAT CGGCACCATC CGCGGAGCCG TGCTGGCGCT CGGGCTGAAC
GACGATTTCG TTCCGGCACT GCCGGTCGGC CTGATGAAGA CGCTGAGCGG AAGCGGGGCG
CGCGGCCTGA TGGTTGATGT GATGACGACC TACGGTGTCG ATTCCTTTCA GGGCAAGCTG
GCGGCGATCA TCCAGGGCTC GACGGAAACG ACGTTTTACG TGCTGGCTGT CTATTTTGGC
AGTGTCAATA TCACCAAGAC CCGCTACGCC CTGGCCTGCG GCCTGATCGC CGATGCCGTC
GGGCTGGTTG GCGCCATCCT GATCGGTTAC GCCTTCTTCC ATTGA
|
|---|
| Protein sequence | MLNRIWVAFI LVGFVAAVAQ LLQGDLDIFT RVLTGLFDTA RTGFDISLGL VGVMSLWLGV
MKIGERGGLI QLFGRLVGPF FRRIFPDIPT GHPAGGSIVM NFSANILGLD NAATPLGLKA
MRELQEINPQ PDTASNPMIM FLVLNTAGIT LIPTSVIAIR QSIALKQGLV GFNAADIFLP
TLLGTFVSFC AGLVAVAIWQ RINLFCKPVL AFFAGFAALM GGLYWWLGGM PAEQMAQMIG
LLGSGIIVAI IALFVAVAAW RGIDVYESFI EGAKEGFGVA VQIIPYLIAM LVAISVFRTT
GGMDYLIGTI RGAVLALGLN DDFVPALPVG LMKTLSGSGA RGLMVDVMTT YGVDSFQGKL
AAIIQGSTET TFYVLAVYFG SVNITKTRYA LACGLIADAV GLVGAILIGY AFFH
|
|---|
| |