Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3250 |
Symbol | |
ID | 3566388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3499443 |
End bp | 3500264 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681721 |
Product | Alpha/beta hydrolase fold |
Protein accession | YP_286450 |
Protein GI | 71908863 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.000000000180136 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAGC ACCCCGGCAT CGGCAAGACC CTTTTGGCAG CAGATCATCA AACGAATTAC CTGGAGCAGG GCGAGGGCAA GCCGCTGTTC CTGTTGCATG GTTCCGGCCC TGGCGTTTCG GCCTGGACCA ACTGGAGCAA GGTCATGCTC GACCTGGCGC AAAACTTTCG CGTCATCGCA CCGGATATCG CCGGCTTCGG TTTTACCGAG TTCAAGTCCG ACAACAAGTA CGACATCAAA CTGTGGGTTC GCCACCTGAC CGGCATCATG GATGCGCTGG GTATCGACAA GGCGTCCTTC GTTGGTAACT CCTTCGGCGG TGCGCTATCG ATCGGCCTCG CCCTGTTTGC GCCGCAGCGT GTCGACAAGC TGGTACTGCT TGGCACGCCG GCCGGTGAGT TCGTGCAGAC CCCCGGCCTG CGTTCGGCCT GGGAATATGA GCCGTCGATG GAAAACATGG AGCGGACGAT GCGCCTGTTC CCGTTCAACC AGGCCATCAT CACCGAAGAA ATGATCCGCA CCCGCTACGA GGCCAGCGCC CGTCCCGGGG CTCAGGATGC CTTGCGCCGG CTGTTGCCTA GGCCGAATGC TGAAGGCCCG ACTATGGTCA AGGGCTTCCC GGAGGCTTCG GTCGCCAAGA TCGAAGCGCC GACGCTGGTC CTGCATGGCC GCGAAGATGC AGTCGTGCCG CCGCAGTGCG GCTTCCTGCT GGCCAATGCC ATTCCCAAAG CCGAGTTGCA TCTGTTCGGA CAGTGCGGGC ATTGGGTTCA GACCGAGCAT CGTGAGCGCT TCCTGCAACT GGTGCGCGAT TTCTGCGCCT GA
|
Protein sequence | MEKHPGIGKT LLAADHQTNY LEQGEGKPLF LLHGSGPGVS AWTNWSKVML DLAQNFRVIA PDIAGFGFTE FKSDNKYDIK LWVRHLTGIM DALGIDKASF VGNSFGGALS IGLALFAPQR VDKLVLLGTP AGEFVQTPGL RSAWEYEPSM ENMERTMRLF PFNQAIITEE MIRTRYEASA RPGAQDALRR LLPRPNAEGP TMVKGFPEAS VAKIEAPTLV LHGREDAVVP PQCGFLLANA IPKAELHLFG QCGHWVQTEH RERFLQLVRD FCA
|
| |