Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3241 |
Symbol | |
ID | 3566587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3492118 |
End bp | 3493263 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637681712 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_286441 |
Protein GI | 71908854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.000702514 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGTC GCCAGCTTCT CTCTGTTCTG TCTGCCGCCT GCCTGCTTGC CTTCAGCGGC ATCAACCATG CCCAGGCGCA AACCGTCACC ATTGGCGTCA GCGTCAGCTC GACCGGCCCG GCCGCTTCGC TCGGCATCGC CCAGAAGAAC ACCATCGAAC TGCTGCCGAA GACGCTGGGC GGCATGCCGG TGAACTACGT CGTGCTCGAC GACGCCTCCG ATCCGACATC GGCCGGCAAG AATGCCCGTC GCTTTGCCGA TGCCGATCAC GTTGATGCCA TCATCGGTTC AACCACCGTG CCGACCTCGC TGGCCGTGGC CGAAGTGGCC GGCGAAGCGA AGATTCCGCA AATCGCCCTG GCCCCGTTCC CGCCCAAGCA GATCCAGTGG GTCTTCCCGC TGCCGCACGG GGTTGGCGTG ATGTCCGCCG CACTGTTCGA GGAAATGAAG AAGCGTGACA CCAAGACCAT CGCCTTCATC GGCTTTTCCG ACGCCTACGG CGAAGCCTGG CTGAAGGATG TCGAAAAGCG CGCCGAAGCC AACGGCATCA AGCTGGTCGC CGTCGAGCGC TATGCCCGCA CCGACCAGTC GGTCACGGCC CAGGCCCTGA AGCTGGTTGG CCAGAAGCCG GACGCCATCT TTATCGCGGC TTCCGGAACC CCGGCCGCGC TGCCGATGCG TGCTTTGCGC GAACGTGGCT TCAAGGGCCA GTTCTATCAG ACCCACGGCG CCGCCAATAA CGACTTCCTG CGCGTCGCCG GTAATTCCGA CGAAGGCGTG ATCCTGCCGA CCGGGCTGGT GCTGGTGGCC GAGCAACTGC CGGACAGCAA TCCGAGCAAG AAGGTAGCAC TCACTTACCT GAAGGCTTAT GAAGGCAAGC ACGGTGCCGG TTCGCGCAAC CCGTTCGGCG CCTATGCCCA TGATGCCTAC CTGCTGCTCG ACAAGGCCGT GGCCGCCGTC GGCAAGAAGG CCGTACCTGG TACGCCGGAA TTCCGCGCCG CCTTGCGCGA TGCGCTGGAA AAGACCAACA ATGTGCCTTT GACGCACGGT AGCGACACCA TGTCGGCGAC GGATCACTCG GGTTTGGGCG AAGGGGCGCG GGTATTGATC ACGATCGAGA AAGACAGCTG GAAGCTGTTG AAGTAA
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Protein sequence | MKRRQLLSVL SAACLLAFSG INHAQAQTVT IGVSVSSTGP AASLGIAQKN TIELLPKTLG GMPVNYVVLD DASDPTSAGK NARRFADADH VDAIIGSTTV PTSLAVAEVA GEAKIPQIAL APFPPKQIQW VFPLPHGVGV MSAALFEEMK KRDTKTIAFI GFSDAYGEAW LKDVEKRAEA NGIKLVAVER YARTDQSVTA QALKLVGQKP DAIFIAASGT PAALPMRALR ERGFKGQFYQ THGAANNDFL RVAGNSDEGV ILPTGLVLVA EQLPDSNPSK KVALTYLKAY EGKHGAGSRN PFGAYAHDAY LLLDKAVAAV GKKAVPGTPE FRAALRDALE KTNNVPLTHG SDTMSATDHS GLGEGARVLI TIEKDSWKLL K
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