Gene Daro_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3236 
Symbol 
ID3566582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3486135 
End bp3487184 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content63% 
IMG OID637681707 
Productinner-membrane translocator 
Protein accessionYP_286436 
Protein GI71908849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.0230482 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG GTATCTTTGC CGTCCTGGCT CAGGATGGCG TGACCAACGG CGCGGTTTAT 
GCGCTATTGG CCATGGCGCT GGTGCTGGTC TTTTCGGTGA CCCGCATCAT CTTTCTGCCG
CAAGGCGAAT TCATCGGTTT TGGCGCCTTG ACGCTGGCCG CCCTGCAAGG GGGCCAGTTT
CCGAAACTGA TCTGGCTGCT GATCGGCATT GGCATCCTGA CTTTTCTGGT CGAGCTCGGC
TCGGCGCTGC GGCAAGTCCG CTACAAGCCG TTGCCGAAGC GCCACCTGAT GTGGAGCGGC
GTCGAGAACC TGTTCTACCC GCTGTTCGTC TGGGCGCTGG CTCATCTCTT CAACTGGCAG
GGCATGCCGA TGGTGGTCCA GGTCCTGTTC ACGCTGGGGG TGACCGTGCC GCTCGGCATC
ATGATCTATC GCATTGCCTT CCAGCCGATG GCCGAGGCTT CGGTGCTGGT GCTGCTAATC
GTCTCGGTCG GCGTGCATTT CGCGATGCTT GGCATGGGCC TGTTCATCTT CGGGCCGGAA
GGTTCAACCA CGCTGCCGTT CACCGACTGG AGCACCGAGC TCGGCGCCAT GCTGGTTTCC
GGCCAGAGCG TCGTGGTTAT GGCGGTTTCC GCCAGCCTGA TCGGTGGCCT CTACCTGTTC
TTTGACCGTA CCCTTTACGG CAAGGCCCTG CGGGCCACGG CGGTCAATCG CAAGGGGGCG
CAACTGGTCG GCATCGGCAC TACACAGGCC GGGCGCATGG CCTTCGGCCT AGCCGCTGCA
CTGGGCACGC TGGCCGGCAC GCTGATCGCC CCGCTCAATA CGGTCGGTTA CGACACCGGC
TTTGTCGTTG CGCTGAAGGG CTTTGTCGCC GCCATCGTCG GCGGTCTGGC CAGCTATCCG
CTGGCGGCGG CCGGGGCGAT CCTGGTCGGC CTGCTCGAAA GCTATTCCTC GTTCTGGGCC
AGTGCCTACA AGGAAGTCAT CGTGTTCACG CTGATCATTC CGGTGCTCGC CTGGCGCTCG
CTGACTTCCG GTCATGGAGA TGAAGAATGA
 
Protein sequence
MDFGIFAVLA QDGVTNGAVY ALLAMALVLV FSVTRIIFLP QGEFIGFGAL TLAALQGGQF 
PKLIWLLIGI GILTFLVELG SALRQVRYKP LPKRHLMWSG VENLFYPLFV WALAHLFNWQ
GMPMVVQVLF TLGVTVPLGI MIYRIAFQPM AEASVLVLLI VSVGVHFAML GMGLFIFGPE
GSTTLPFTDW STELGAMLVS GQSVVVMAVS ASLIGGLYLF FDRTLYGKAL RATAVNRKGA
QLVGIGTTQA GRMAFGLAAA LGTLAGTLIA PLNTVGYDTG FVVALKGFVA AIVGGLASYP
LAAAGAILVG LLESYSSFWA SAYKEVIVFT LIIPVLAWRS LTSGHGDEE