| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3235 |
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| Symbol | |
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| ID | 3566581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3484345 |
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| End bp | 3486138 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681706 |
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| Product | inner-membrane translocator:ABC transporter related |
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| Protein accession | YP_286435 |
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| Protein GI | 71908848 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component
[COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.0695796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGT CCACCAAAAA ACTTCAGTGG CTGATGTTCG GCTGGTTCTT CCTGTTCCCC
TTCCTGCCGG TGCCGGGTTA CTGGATCACC ATCGGCAACT ACATCGGCCT CTATTCCATC
GTCGCGCTCG GTCTGGTGCT GCTGACCGGT ATCGGCGGCC TGACCTCCTT CGGGCAGGCG
GCTTTTGTCG GCCTTGGCGC CTACACCACG GCCTACCTGA GTACGACGCT CGGTTGGTCG
CCATGGATCG GCCTCGGGGC CGGACTGGTC GTCTCCGGGC TGGCCGCCGG CTTGATCGGC
AGCATCACCG TGCGCCTGTC CGGTCACTTC CTGCCGCTGG CGACCATCGC CTGGGGGCTG
TCGCTGTACT ACCTGTTCGG TACGCTGGAA TTTCTCGGCA AGTACGATGG CCTGTCCGGC
ATCCCGCCGC TCAGCCTGTT CGGCCTCGAC CTGTCGTCGC CCCGGGTCAT GTACGGGATG
ATCTGGTTCT GTCTCGGTGG CTGCCTGTGG CTGGTACTCA ACCTGCTCAA CTCCCGGCCG
GGCCGGGCCA TCCGGGCTCT GGCCAAGGGC AAGACCATGC CCGAGGCGAT GGGCATCAAC
ACCGCCCAGT ACAAGATTCT GATCTTCGTG CTGGCAGCCT TGATGGCGAG CCTTTCCGGC
TGGCTGTACG CCCATCTGCA ACGTTCGGTC AGCGCGACGC CCTTCGGTCT GAACATGGGT
ATCGAATACC TGTTCATGGC AGTGGTCGGT GGCGTTGGTC ACGTCTGGGG CGCCATCCTC
GGCGCCGTGG TGATGACCGG CCTGAAGAGC CAGTTGCAGG ACTGGTTGCC GTTGCTGCTC
GGGAGTAATG GCAATTTCGA GATCGTCGTC TTCGGCGTGA TGATCGTGCT GCTGCTGTTG
TGGTCGCGCG ATGGTCTGTG GCCGTGGGTG GCTGCGGTGT GGGCGAAGTT TCATCCGCCC
GAGCCGGAGG TCGTCGCACC GGCCATTGCA CCGGATGGTT ATGGCGACAT GAAGCGTCGT
TCCAAGCCCG AGCCTGGGGC GCTGATCCTC GAAGTGAATG AGGCGCGCAA GCAGTTCGGC
GGCCTGGTCG CCGTCAAGGA CATGACCTTC GAGATCAAGG CGGGCGAAGT GGTCGGTCTG
ATTGGTCCGA ACGGCGCTGG CAAGTCGACG ATGTTCAATC TGGTGACCGG CGTGCTGCCG
GCCAGCAGCG GCGAGATCCG CTTCGGCGGC GAGCGCATCG ACCAGCTCGA TTCCCGTCGC
ATCGTGCAGA TGGGGATCGG CCGCAGCTTC CAGCATGTGC ATCTGATCCC GCATCTGTCA
GTGCTGGAAA ACGTTGCCAT GGGCGCCCAT CTGCGTGGCA AGAGCAGCCC ATTGAGTGCG
GCGTTGCGCA CGGATCGTCA TGAAGAGGCG CAGCTGCTTT TCCTGGCGGC CGAGCAGATC
CGCCGCGTTG GCCTAGGCGA CTACATGCAT ACGCCGGCCG GTAGCCTGGC TCTCGGCCAG
CAGCGGATTC TCGAAATCGC CCGTGCCTTG TGCACGGACC CGACCCTGCT GCTGCTCGAT
GAACCGGCGG CCGGCCTGCG CTTGAAGGAA AAGGAAGCAC TGGCGGCATT GATCAAGCAA
TTGAAGGGCG AAGGCATGTC GGTGTTGCTG GTCGAGCACG ACATGGATTT CGTGATGGGC
CTGACCGACC GTCTGGTCGT CATGGAATTC GGTAGCAAGA TCGCCGAAGG TCTGCCGGTC
GAAATTCAGA ATAACGAAGC CGTCTTGGCG GCTTACCTCG GAGGCATCGA ATGA
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| Protein sequence | MKMSTKKLQW LMFGWFFLFP FLPVPGYWIT IGNYIGLYSI VALGLVLLTG IGGLTSFGQA
AFVGLGAYTT AYLSTTLGWS PWIGLGAGLV VSGLAAGLIG SITVRLSGHF LPLATIAWGL
SLYYLFGTLE FLGKYDGLSG IPPLSLFGLD LSSPRVMYGM IWFCLGGCLW LVLNLLNSRP
GRAIRALAKG KTMPEAMGIN TAQYKILIFV LAALMASLSG WLYAHLQRSV SATPFGLNMG
IEYLFMAVVG GVGHVWGAIL GAVVMTGLKS QLQDWLPLLL GSNGNFEIVV FGVMIVLLLL
WSRDGLWPWV AAVWAKFHPP EPEVVAPAIA PDGYGDMKRR SKPEPGALIL EVNEARKQFG
GLVAVKDMTF EIKAGEVVGL IGPNGAGKST MFNLVTGVLP ASSGEIRFGG ERIDQLDSRR
IVQMGIGRSF QHVHLIPHLS VLENVAMGAH LRGKSSPLSA ALRTDRHEEA QLLFLAAEQI
RRVGLGDYMH TPAGSLALGQ QRILEIARAL CTDPTLLLLD EPAAGLRLKE KEALAALIKQ
LKGEGMSVLL VEHDMDFVMG LTDRLVVMEF GSKIAEGLPV EIQNNEAVLA AYLGGIE
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