Gene Daro_3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3234 
Symbol 
ID3566580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3483602 
End bp3484348 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content63% 
IMG OID637681705 
ProductABC transporter related 
Protein accessionYP_286434 
Protein GI71908847 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.171288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACAATGCAAA ACCGGTCCTC GAGACTCGCA ACCTGTGTGT GCGCTACGGC 
AAGGTCGAGG CCCTGCGGGC TGCCTCGATC AGCCTGCGGG CCGGCGAGAT CGTTACCGTC
ATCGGCCCGA ATGGCGCCGG CAAGTCATCG CTGCTCAACG CCATCATGGG TGCCTTGCCC
AGCGAGGGGC AGGCGGGAGG CGAGGTGCTC TACCAGGGGC ACGACGTGTC GCATCACGCC
ATCGAACTGC GTCTCGGCAA GGGACTGGCA CTGGTGCCGG AAAAGCGTGA ATTGTTCACC
AGCATGACCG TCGAAGATAA CCTGGTGCTC GGCGCCTATC GCCGGCGCAA GGATGGCTGG
TCCTACCGCG ATGGACTGGA GGGCATCTAC AGCGTTTTTC CCCGGCTCAA GGAGCGCCGC
AAGCAGCTGG CTGGCACGAT GTCCGGTGGC GAGCGGCAGA TGGTGGCGAT TGGCCGGGCG
CTGATGAGCG ATCCCAAGGT GCTGATGCTC GACGAGCCGT CGCTCGGCCT GGCGCCGCGC
GTCATGGCCG AGGTCTTCCA CGTCATTTCG CATCTGCGTG AAACCGGGGT TGCCACGCTG
CTGATCGAGC AGAACTCGCG GGCAGCCTTG CAGGTCTCCG ATTACGGCTA TGTGCTGGAA
GTCGGCGACA TCACGCTGGA AGGCAAGGCC AAGGATTTGG CGCAGAATCC GAAAGTGATC
GAAGCCTACC TTGGAGCCAA GCATTGA
 
Protein sequence
MSTDNAKPVL ETRNLCVRYG KVEALRAASI SLRAGEIVTV IGPNGAGKSS LLNAIMGALP 
SEGQAGGEVL YQGHDVSHHA IELRLGKGLA LVPEKRELFT SMTVEDNLVL GAYRRRKDGW
SYRDGLEGIY SVFPRLKERR KQLAGTMSGG ERQMVAIGRA LMSDPKVLML DEPSLGLAPR
VMAEVFHVIS HLRETGVATL LIEQNSRAAL QVSDYGYVLE VGDITLEGKA KDLAQNPKVI
EAYLGAKH