| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3221 |
|---|
| Symbol | |
|---|
| ID | 3566606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3472606 |
|---|
| End bp | 3473076 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637681692 |
|---|
| Product | general secretion pathway protein G |
|---|
| Protein accession | YP_286421 |
|---|
| Protein GI | 71908834 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
|---|
| TIGRFAM ID | [TIGR01710] general secretion pathway protein G
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.287852 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCG GTCCTGTCAT TCATCGTCTG CATACCGTGG CGCTTCTTCC CCGTTCGCTC
GTCCTGTCGC TCCAGCGCGG TTTCACGCTG CTCGAACTGC TCGTCGTCAT GGTCATCATC
GGCCTGCTGG CCGGTTATGT CGGACCCAAA TACTTCGCCC AGATCGGCAA ATCCGAGGTC
AAGGCGGCGC GTGCCCAGAT CGACGCGCTG GAAAAGGCGC TGGATCAATA TCGCCTTGAT
GTCGGCCGCT ATCCGACCAG CGAAAACGGC CTGGCCGCGC TGATGAAGCG GCCGCCTTCC
GAGAACCGCT GGCAGGGCCC TTACCTGCGC AAGGAAGTAC CGGCCGATCC GTGGGGCCAA
CCCTACCAGT ACGTCCAGCC CGGTGAACAC GGCGAATTCG ATCTCTTTTC GCTGGGCAAG
GATGGCAAGC CCGGCGGTGA GGGCGAAGCC GCCGACATCG GCAACTGGTG A
|
|---|
| Protein sequence | MISGPVIHRL HTVALLPRSL VLSLQRGFTL LELLVVMVII GLLAGYVGPK YFAQIGKSEV
KAARAQIDAL EKALDQYRLD VGRYPTSENG LAALMKRPPS ENRWQGPYLR KEVPADPWGQ
PYQYVQPGEH GEFDLFSLGK DGKPGGEGEA ADIGNW
|
|---|
| |