Gene Daro_3219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3219 
Symbol 
ID3566604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3471387 
End bp3471920 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID637681690 
Producthypothetical protein 
Protein accessionYP_286419 
Protein GI71908832 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones69 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.289131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCGA TACGTGGCGG CCAGCCGGGC ATCTCGGGCA AACACCAGAA GGGCATCACC 
TTCCTGGCCG TGCTGTTCAC CATCGCCATC AGCGGCATTG CACTGGCCGG CACCGGGGCG
CTGTGGCAAA TGGAAACCCG GCGCGAGAAG GAAAAGGAAC TGCTGTTCGC CGGTGAGGAA
TATCGCCAGG CCATCGCCAG CTATGTCGAC AACTCGCCGG GTGACCCGCA ATACCCGGTC
AAACTGGCTG ATCTGCTGCA GGATCCGCGC TTCCCGATGC CGGTCCGCCA TTTGCGCCGC
CTCTATCCGG AACCGATGAG CCTCGACGGC CAGTGGCAGC TGATTCGCCG CCAGGGCCGG
ATCGTCGGTG TCGCCAGCCC ATCCTCTGCA CCGCCAATCA AGGTGGCCGG TTTCCCGCCC
GAGCAAGCTG AATTCGAGAA TGCTGTCCGT TATGCCGACT GGCAATTCAT CCATTCAGGC
AACACGCCGA GTCGACGCCG GATCAATATT CACGACGCCG GGGAGTCGCG CTGA
 
Protein sequence
MVAIRGGQPG ISGKHQKGIT FLAVLFTIAI SGIALAGTGA LWQMETRREK EKELLFAGEE 
YRQAIASYVD NSPGDPQYPV KLADLLQDPR FPMPVRHLRR LYPEPMSLDG QWQLIRRQGR
IVGVASPSSA PPIKVAGFPP EQAEFENAVR YADWQFIHSG NTPSRRRINI HDAGESR