Gene Daro_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3210 
Symbol 
ID3566595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3460570 
End bp3461175 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID637681681 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_286410 
Protein GI71908823 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0000000000028591 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.177382 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAA TCGTAAAGGC GGCCGGTTGG CCCATCTGGC CCTTGTTACT GGCTTCGATT 
ATTTCCGTGG CGCTGATTAT TGAGCGCGTG GTTGCCTTGC GCCGCTCCAA AGTGGTGCCG
CACGGTCTGC TGCAGCGTGC GGTTGGCGAG TTCAAGCGTG GCGCCAATAA CGACAAGCTA
CTGGAAGAGC TCGAAGGCCA CTCACCGCTC GGTCGTGTCC TTTCTGCCGG TTTGCGCAAC
GTCAATTCGA CCCGCGAGAT CATGAAGGAG TCGATCGAGG AAGCCGGTTC CGCAGTTTCC
CATGAGCTGA ATCGTTATCT GACGACACTC GGTACCATCG CCTCGATCAG CCCGCTGATG
GGTCTGTTCG GCACCGTGGT CGGGATGATC GAGATTTTCG GTTCGCAGTC GCCGAGCGGC
GCTAACCCGA TGCAACTGGC CCACGGTATT TCCGTTGCGC TGTACAACAC CGGCTTCGGT
CTGGTCATCG CCATTCCCAG CCTGATTGCC TGGCGGCATT TCCGGGCGCT GGCCGACGGC
TTTGTGGTCG AGATGGAGCA GCAAGCCGTT CGCCTCGTCG AGTACATGCA CGGCGACCGG
AAGTAA
 
Protein sequence
MIEIVKAAGW PIWPLLLASI ISVALIIERV VALRRSKVVP HGLLQRAVGE FKRGANNDKL 
LEELEGHSPL GRVLSAGLRN VNSTREIMKE SIEEAGSAVS HELNRYLTTL GTIASISPLM
GLFGTVVGMI EIFGSQSPSG ANPMQLAHGI SVALYNTGFG LVIAIPSLIA WRHFRALADG
FVVEMEQQAV RLVEYMHGDR K