| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3201 |
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| Symbol | |
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| ID | 3566871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3450422 |
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| End bp | 3451837 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637681672 |
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| Product | Type I secretion membrane fusion protein, HlyD |
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| Protein accession | YP_286401 |
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| Protein GI | 71908814 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.195077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGCC TTAAAACAGC GCTTCATGCC ACCCATGCCT GGTTGGAAAG TGTGGCCCTG
CGCGCGGCGC CGCATGTCGA AAAGGTTCTC GGGAGATTGC CGAACCGGGA AGAGGTCGAA
GTGGTTGATT TCGCGACGGA TGCCGATCTG GCGATGCTGC GTCAGGAGCC GTTGCGCGCA
CGCGTCCTTT TGCGCTCGAT CAGCGTCGTA TTCATCATGT TTGTGCTTTG GGCCGCCATT
GCCCAGCTCG ACGAGGTGAC CCGGGGTGAA GGCCGGGTGA TTCCGTCGCG CCAGATCCAG
ATTCTTCAGA GCATCGACGG CGGGCTGGTT TCAGAAATTC TGGTCAAGGA AGGCGAGGTC
GTTCAGCCCA ACCAGTTGCT GATCAAGATC GATGAAACGC GTTTCGTCTC CTCGGTGAAG
GAAAATCAGG CTCAGTATCT GGGTTTGGTT GCCAAAGCGG CTCGCCTGCG GGCGATTTCT
GAAGGCAAGC CGTTTGTGCC GCCGCCGGAA GTGCTCAAGG CTGATCCTTC GATCGTCCAG
CAGGAACGTC AGTTTTACGA GGCGAGAAAC GACGAGCTGA ATGCCACGGT GTCCATAGCC
CGCCAGCAAC TCGCCCAGCG CCAGCAGGAA CTCAACGAAG CCCAGGCCAA GAGATCGCAG
GCTTCACAAG GCTATGACCT GACCTCCAGG GAACTGGCGG TGACCAAGCC CTTGATCAAC
TCCGGAGCCG TCTCCGAGGT CGAGTTGCTG CGTCTTGAGC GCGACGTTTC GCGCTACCGC
GGTGAGCGTG ACATGGCCTC GGCCCAGATT TCCAGGGTTC AGGCCTCGAT TCATGAAGCC
CAGCGCAAGA TCGAGGAGGT CGAGCTGACC TTCCGCAACG ATGCCAGCAA GGAACTTTCC
GAAACAATGG CCAAGCTGAA CAGCCTGGCA GAAGGCAGCG TCGCGCTGTC AGATCGGGTC
AAGCAGTCGT CGATTCGTTC GCCGGTCAAG GGCACGGTCA AGCGCCTGCT GGTCAATACC
GTCGGTGGCG TCGTTCAGCC GGGCAAGGAC ATGATCGAAA TCGTTCCATT GGAAGACACG
CTATTGCTGG AAGCCAGGGT GTTGCCGCGC GATATCGCCT TCCTGCGGCC CGGGCAGCCG
GCCATGGTCA AGTTCACAGC CTACGATTTC TCCATTTATG GCGGGCTGGA TGGAACGCTC
GAACACATCG GCGCCGACAG CGTCATTGAC GAAAAGGGCA ATGCCTTCTA TACCGTGCGG
GTTCGGACCA ACAAACCCGG TTTTGGCAAT GCCAACCTGC CGATTATTCC TGGCATGGTG
GCAGAGGTCG ATATTCTGAC GGGCAAGAAG AGTGTCCTGG CCTATCTGAT CAAGCCAGTC
CTCAGGGCCA AGAGCGTGGC TTTGACGGAA CGCTGA
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| Protein sequence | MSRLKTALHA THAWLESVAL RAAPHVEKVL GRLPNREEVE VVDFATDADL AMLRQEPLRA
RVLLRSISVV FIMFVLWAAI AQLDEVTRGE GRVIPSRQIQ ILQSIDGGLV SEILVKEGEV
VQPNQLLIKI DETRFVSSVK ENQAQYLGLV AKAARLRAIS EGKPFVPPPE VLKADPSIVQ
QERQFYEARN DELNATVSIA RQQLAQRQQE LNEAQAKRSQ ASQGYDLTSR ELAVTKPLIN
SGAVSEVELL RLERDVSRYR GERDMASAQI SRVQASIHEA QRKIEEVELT FRNDASKELS
ETMAKLNSLA EGSVALSDRV KQSSIRSPVK GTVKRLLVNT VGGVVQPGKD MIEIVPLEDT
LLLEARVLPR DIAFLRPGQP AMVKFTAYDF SIYGGLDGTL EHIGADSVID EKGNAFYTVR
VRTNKPGFGN ANLPIIPGMV AEVDILTGKK SVLAYLIKPV LRAKSVALTE R
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