Gene Daro_3179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3179 
Symbol 
ID3567179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3417790 
End bp3419139 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content63% 
IMG OID637681650 
Producthypothetical protein 
Protein accessionYP_286379 
Protein GI71908792 
COG category[V] Defense mechanisms 
COG ID[COG4452] Inner membrane protein involved in colicin E2 resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGA AACTGCTCTT CAAGATTGCC GCGATCTGCT TCATGTCGCT GTTGCTGCTG 
GTACCGCTGG TCCTGATCGA GGGCCAGATT CGCGACCGCA GCCAGCGCCA GAACGAGGTG
CAAGCCAGCA TTGCCAACAG CGCGGCCGGC GAACAGACGC TGGTCGGCCC GGTGATCGAG
CTACGTTATC GCGAACAGGT CGAGGTGCTG ATTCCCGAGG GCGAGGCCGG ACAGGCAGGG
AAAACCCGGC AGCAGGTGGT CGAGCGGACC CTGATGCTGC CGCCGGAAAA ACTGGTCATG
GCTGGCGAAA CGGTGGTCGA GACGCGCAAC CGGGGCATTT ACCAAGCCCG GCTTTTCCGC
CTCGGTCTCG CTACCAGCGG CCATTTCGTC GTCAAACCCC TGAGCGAGGC AGCCAGCGGC
GGGCGCATTC TGGAAGCGAA CGCCCGGCTG GTGCTTGGCA TTGCCGATCC GCGCGGCGTC
AATAACGACC CCGAGGTGGT GATCAACGGC AAGGCGCATC GTTTTGCCTC GCCGGGCAGC
AAGGGCAAGG GCGATCAGGA ATTGGCCATC CGCCGACTGA GTATCGATCT TGGCCGACTC
GACCTCCAGC GCGAAAGCCG TTTCGACTTC AGCTTTCCGC TGCAGCTGAC CGGCACCGCC
CGACTGGCCA TCGCCCCGAC TGGCGAATCG AATGAAATCG AGCTGAAATC GGCCTGGCCA
CACCCCAATT TCGGCGGCCG CTTCCTGCCC AACAGCCGCA CGGTGACCAA GGATGGCTTT
GGCGCCCGCT GGGAAATCTC GCATCTGGCG CGTAATTTCG AGGCAACGCT GAATCCGGCG
CGCGGCGAAG TGCTGAGCAT CGATTTCGTC GATCCGGTCA ATGTCTATCT GCAATCCGAG
CGGGCCGTCA AATACGGCGT GCTGTTCATC GTGCTGACCT TTGCCGGTTT CTTCCTGACC
GAAATCCTGC GCCGCTCGCC GATCCACCCC ATGCAATATC TGTTGGTCGG TCTGGCGCTG
GCCATCTTCT TCCTGTTGCT GATCGCCTTC TCCGAGCACC TGCCCTTCTA TGCCGCTTAT
GGCTTGTCGG CCGTCGCCTG TATCGGACTG ATCGCCACCT ATCTGGCCGG CGCGCTTGGC
GGCATGCGGC AAGGCCTGGC CTTCGGCGCG GGACTGACCG GCCTTTACGG CGTGCTCTAC
GGCGTGCTGC TGTCCGAGGA CAACGCCTTG CTGATGGGCA GCGTGCTGCT CTTCCTTGCC
CTCGGCACCA CCATGCTCGC CACCCGCCGC CTTAACTGGT ATCGCCTCGG CGCCCAGCTC
AACCCAGACA GCGAAGCCAG CGAGCCATGA
 
Protein sequence
MDKKLLFKIA AICFMSLLLL VPLVLIEGQI RDRSQRQNEV QASIANSAAG EQTLVGPVIE 
LRYREQVEVL IPEGEAGQAG KTRQQVVERT LMLPPEKLVM AGETVVETRN RGIYQARLFR
LGLATSGHFV VKPLSEAASG GRILEANARL VLGIADPRGV NNDPEVVING KAHRFASPGS
KGKGDQELAI RRLSIDLGRL DLQRESRFDF SFPLQLTGTA RLAIAPTGES NEIELKSAWP
HPNFGGRFLP NSRTVTKDGF GARWEISHLA RNFEATLNPA RGEVLSIDFV DPVNVYLQSE
RAVKYGVLFI VLTFAGFFLT EILRRSPIHP MQYLLVGLAL AIFFLLLIAF SEHLPFYAAY
GLSAVACIGL IATYLAGALG GMRQGLAFGA GLTGLYGVLY GVLLSEDNAL LMGSVLLFLA
LGTTMLATRR LNWYRLGAQL NPDSEASEP