Gene Daro_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3170 
Symbol 
ID3567170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3408089 
End bp3408973 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content66% 
IMG OID637681641 
Producthypothetical protein 
Protein accessionYP_286370 
Protein GI71908783 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGT TGAATCACCT GCTTGCCGCC ACCGATTTCT CGGCCCCGGC GCGTCATGCC 
GCTGAAAGAG CGGCGCTGGT GGCCCACAGC ACCGGGGCCC AGCTCGACCT GATCCACGTC
GTGACCCTGG CGCCAATGGT GAAACTGCGC CAGCTGATCG GCGACCTGCC GCCGGAAATC
GAACAACGCC TGCTCGACGC CAGCCGCGAC GAATTGCAGC AACTGGTGGC CCTGCTCCAT
TCGCACCACG GCATTACAGC CAACGGCCAG GTAGTGTGCG GCTCGCTGCT CGATGAAATC
ACCCGGCACG CAGGCAGTCT GGCGGCCGAG TTGCTGGTCT TTGGCTCGCA TGGCAGCAGT
TTCATGCGCC ATCTGCTCCT CGGCTCGACG GCCGAGCGCC TACTCACCCG CAGCACGCTG
CCCATGCTGG TCGTCAAGCA GGCCGCCCAC GAGGCCTATA AAACCCTGCT CGTACCGGTC
GATTTCTCGC CCTCTTCGCG CCGCGCCCTG GCCCTGGCCC AGGCCATCGC GCCCCGTGCC
GAAATCATCC TGCTCCACGT CGCCGCCCTG CCCTTCGAAG GCAAGCTCAG ATACGCCGGC
ATCGACGACG ACATCATCGC CCGTTACCAG GCCGCGGCGA TGGTCGAAGC AAGGCGGTCG
CTGGCCGCCC TGCAGGCACG CGCCGCCCCC GGCGTATCCG GCATCCGCCT GGAAGTTCGG
CAAGGCGACC CGTCGCAAAG CATCCTGCAA TACGAGCAGG AATTCGATTG CGACCTGATC
GTCATCGGCA AGCACGGCGA AAGCCTGGCC GAAGACCTTC TGCTCGGCAG CGTGGCACGC
CACGTGCTGG AAGAGTCACA GAGCGACCTG CTGATTTCGC TGTGA
 
Protein sequence
MASLNHLLAA TDFSAPARHA AERAALVAHS TGAQLDLIHV VTLAPMVKLR QLIGDLPPEI 
EQRLLDASRD ELQQLVALLH SHHGITANGQ VVCGSLLDEI TRHAGSLAAE LLVFGSHGSS
FMRHLLLGST AERLLTRSTL PMLVVKQAAH EAYKTLLVPV DFSPSSRRAL ALAQAIAPRA
EIILLHVAAL PFEGKLRYAG IDDDIIARYQ AAAMVEARRS LAALQARAAP GVSGIRLEVR
QGDPSQSILQ YEQEFDCDLI VIGKHGESLA EDLLLGSVAR HVLEESQSDL LISL