Gene Daro_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3163 
Symbol 
ID3568404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3399762 
End bp3400403 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID637681634 
Producthypothetical protein 
Protein accessionYP_286363 
Protein GI71908776 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCC TGCCTCAATT CTTCGATATC GTTCTGCACC TCGACAAGCA TCTGGCCATT 
CTGGTGCAGC AGCATGGGCT GTGGATCTAC GGCATCCTGT TCTTTATTGT TTTTGCAGAA
ACCGGTTTTG TCGTGACGCC CTTCCTGCCT GGCGATTCGC TGCTCTTCGT GGCTGGCGCG
CTGGCTGCCA TCGGCGAGGG CGGCATGGAT ATCTTCACGC TGATCGGCGT ACTGACGGCG
GCGGCAGCGA TTGGTAACAC GGTCAATTAC CAGATCGGCC GCTTCCTCGG GCCGAAGGTC
TTTCACTGGG AAAACTCGCG TTTCTTCAAC CGCGATGCGC TGGTCAAGAC ACACGCTTTC
TACGAGAAAC ATGGCGGCAA GACGCTGGTC ATCTCGCGCT TTCTACCGCT GTTCCGCACC
TTCGCCCCCT TCGTGGCCGG CATCGGTTCG ATGAGCTATA CCCGCTTTAC GCTGTTCAAC
CTGATCGGCG CGCTGGGTTG GGTCGTTTCG CTGTGCCTGG CCGGCTACTG GCTGGGCAAC
ATGCCATGGG TGAAAGCCAA TCTGTCGTTG ATCATCGTCG GCATCATCGT GTCTTCATTG
ATTCCCATCG GCTGGGGTTA CCTGAAGAGC AAGGAAGCCT GA
 
Protein sequence
MELLPQFFDI VLHLDKHLAI LVQQHGLWIY GILFFIVFAE TGFVVTPFLP GDSLLFVAGA 
LAAIGEGGMD IFTLIGVLTA AAAIGNTVNY QIGRFLGPKV FHWENSRFFN RDALVKTHAF
YEKHGGKTLV ISRFLPLFRT FAPFVAGIGS MSYTRFTLFN LIGALGWVVS LCLAGYWLGN
MPWVKANLSL IIVGIIVSSL IPIGWGYLKS KEA