Gene Daro_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3161 
Symbol 
ID3568402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3398411 
End bp3399058 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content63% 
IMG OID637681632 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_286361 
Protein GI71908774 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA TCGTCATCCT GATTTCCGGT CGTGGCAGCA ACCTGGAGGC GCTGATTGCC 
GCCCGGGAGG CTGGAAGTCT GCCCGTCAAC ATCGCCGCCG TGATCAGCAA CCGGCCTGAG
GCCATGGGGC TGGAGACGGC AGCCAAAGCC GGGATTACCA CCCACTTCAT CAACCATAAG
GCCTTCGCCG GGCGCGAGGC TTTTGATGCT GCGCTGGCCG AATGTATCGA CACCTTCGCG
CCCGATCTTG TGGTGCTGGC CGGCTTCATG CGCATCCTCA GTGATGGCTT CGTGCGCCAC
TACGAGGGGC GGTTGATGAA CATCCACCCG TCGCTGCTGC CGTCCTTCCC CGGCCTGCAC
ACGCATCAGC GGGCGCTGGA AGAAGGCGTG CGCATCCACG GCTGCACGGT CCATTTTGTG
ACGCCGACGC TGGATCACGG TCCGGTGATC ATCCAGGCGG CCGTACCGGT ACTCGACAAC
GACAGCGAAG AAAGCCTGTC GGCCCGTGTG TTGCGCCAGG AGCACCTGGT TTATCCGCAG
GCGGTGCGCT GGTTTGCCGA GGACAAGTTG ACGCTGGAAA ACGGCCGTGT CCGGCTGGCG
GCGGAACTGG CCGACCATGC GGTTTTGATC TCGCCCGAGA TCCGCTAA
 
Protein sequence
MKNIVILISG RGSNLEALIA AREAGSLPVN IAAVISNRPE AMGLETAAKA GITTHFINHK 
AFAGREAFDA ALAECIDTFA PDLVVLAGFM RILSDGFVRH YEGRLMNIHP SLLPSFPGLH
THQRALEEGV RIHGCTVHFV TPTLDHGPVI IQAAVPVLDN DSEESLSARV LRQEHLVYPQ
AVRWFAEDKL TLENGRVRLA AELADHAVLI SPEIR