| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3159 |
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| Symbol | |
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| ID | 3568400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3396171 |
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| End bp | 3397433 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637681630 |
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| Product | Fmu (Sun)/ nucleolar NOL1/Nop2p |
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| Protein accession | YP_286359 |
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| Protein GI | 71908772 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 0.876186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCC GTTTCACACC CGCCCTGTTT GCCCATGCCG AAGCTGTCCT CGGCCAGTTG
CTGCGTTTCG ATCATCCGGC CGATGCCGTG GTTTCACGCT ATTTCCGCGA TCATCGCGAA
CTTGGCCATG CCGACCGCGC CTTCGTCGCT GAAACGGTCT TCGCTGTGCT GCGCCGGGGG
CGGAGCCTGG AAGCGCGCTG TGGTGGCCAG ATGTCCGACC GTCACCGCCT GCTGGCGGCG
CTGGCCGTGG CGCGTGGCTG GAGCCAGCGC GAACTGGCAC CGGTCCTCAA GGCAAGCGAA
GAGGAATGGT TGTCCGGGGT CAAGGCGGTG CGCGAAGAAG ACTTGCCGCC AGCCGTTCGC
TGTGATCTGC CGGACTGGCT CTACCAGCGC CTCGAAGCCC AGTTTGGTGC TGAAGAAACG
CTGCTCCTGT CGAAAGCGCT GAATCAGCCG GCCCCGCTCG ATCTGCGCGT CAATACGCTG
AAAATGAACC GTGAGGTGCT GCTGGAAAAA CTGGCAGCCG ACGGTATTGC CGCTGAAGCC
GCCCCCTTGT CGCCGATGGC CGTCCGCCTG CGCGACAAGC CGGCCCTGGC CAAGACCGCA
TTATTCCTCG AAGGCGCTTA TGAAGTGCAG GACGAAGGCA GCCAGTTGCT CGGCTACCTG
ATGGAGCCCA AGCGCGGTGA AATGGTGGTC GATTTCTGCG CCGGTGCCGG CGGCAAGACG
CTGCTGCTCG GCGCCTTGAT GCGCAATACC GGGCGCCTCT ACGCCTTTGA TGTTTCTGAC
AAGCGCCTCG CCAACCTGAA GCCCCGACTG GCCCGTTCCG GCCTGTCCAA CGTCCATCCG
GCCCGCATCG AACACGAGCG CGACACCAAG ATCAAGCGCC TGGCCGGCAA GGCTGACCGG
GTGCTGGTCG ATGCGCCGTG TTCCGGTCTC GGCACGCTGC GCCGCAATCC CGACCTGAAA
TGGCGGCAGA GCGAAACTTC GGTCGCCGAA CTGACGGTCA AACAAGCCTC GATTCTCGAA
GCGGCAGCCA AGCTGGTTCG CCCCGGCGGC CGTCTGGTCT ATGCCACCTG CAGCCTGCTG
AGTGCGGAAA ACGACGAAAT CATCGCCGCT TTCCTGGAAA AGCATCCCGA TTTCACGCTG
ACTCCGGCTT CGGCCGTGCT CGCCAAGCAG GACATCGCCT ACGAGGGTGA CGTGCTGCGT
TTGCTGCCGC ATAAACACAA TACCGACGGT TTCTTCGCGG CCATTCTGGA TAAAAAGGCA
TGA
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| Protein sequence | MKARFTPALF AHAEAVLGQL LRFDHPADAV VSRYFRDHRE LGHADRAFVA ETVFAVLRRG
RSLEARCGGQ MSDRHRLLAA LAVARGWSQR ELAPVLKASE EEWLSGVKAV REEDLPPAVR
CDLPDWLYQR LEAQFGAEET LLLSKALNQP APLDLRVNTL KMNREVLLEK LAADGIAAEA
APLSPMAVRL RDKPALAKTA LFLEGAYEVQ DEGSQLLGYL MEPKRGEMVV DFCAGAGGKT
LLLGALMRNT GRLYAFDVSD KRLANLKPRL ARSGLSNVHP ARIEHERDTK IKRLAGKADR
VLVDAPCSGL GTLRRNPDLK WRQSETSVAE LTVKQASILE AAAKLVRPGG RLVYATCSLL
SAENDEIIAA FLEKHPDFTL TPASAVLAKQ DIAYEGDVLR LLPHKHNTDG FFAAILDKKA
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