Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3158 |
Symbol | |
ID | 3568399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3394912 |
End bp | 3396174 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637681629 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_286358 |
Protein GI | 71908771 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 0.633544 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA AGAGTCCGGC CCTGCGCCTG ATCAACGATC TGCTGGCAGA TTTCCGCGAC CCGGAATTCA TCTGGCAGGT GGTCGCACTG GTTGCGTGTC TAGGCTTGGC TTTTCTGGTG GCGCGCTGGT GGCAGGGGCG CCATGCCGAA GGCGCCGGCC GTTTCTCCGA CGCCGGTTCC CGACTGGCGT TTCCGATAAG CGGCATGGTG CTGGCCGGCC TGACCATCGC CACGCTGGGT ACGCTGATTC ACGTCAATCT GCTCAAACTG GCCATGCCGC TGCTCGGTTC GATGGCCTTG GTGCGCGGTG TCATTTTCGT GCTACGGCAG GCCTTTCCCC GGGCGACCTG GCTGACGGCG TGGGAGCGCA TCATCGCCGC CACGGTCTGG GTCTGGCTGG CGCTGTACAT CACCGATCTG GCGCCGTATG TCATTGATGC CATGGAAGGG GTGGAATTTC ATGTCGGCAA GCAGCACGTC GATTTGTGGA CCATCCTGCG GGCCGTGGCG ACCATCTTCC TGACCGTGGT TTTCGCCCTG TGGATTGCTG GCGTGATCGA GGCGAAGCTG ATGCGCCTGC ATACGCTCGA TGCCAATCTG CGCATCGTCG GTGTTCGGGT CGCCAAGGCT GGCCTGACGG TCATTGCCAT CCTGACCAGT CTGGCCCTGG TCGGCATCGA CATGACGGCG CTCTCGGTGT TCACCGGTGC CCTTGGTGTA GGACTCGGCC TGGGCTTGCA GAAGATCGCC AGCAATTACG TCTCCGGCTT CATCATCCTG CTTGATCGTT CCATCCGTAT CGGCAATATC GTGCAGGTTG GCAGCGACAG CGGCGAAGTC ACGCAAATCA CCACACGCTA CACTGTGCTC AAGCATTCGG GCGGCACCGA ATTCATTGTG CCGAACGAAA CGCTGATCGG CACCACGGTA CAGAACCAGA CCTACTCCAA TACGCAAATC CGCCTGGCGA CGACGCTTGG CGTCGCCTAC GACAGTGATC TGGATCTTGC CTGCCGCCTG ATGACTGACG CCGCCGCCGC CCATTCCCGC GTGCTGGTTG AGCCGGCACC CAAGGCCTTC CTGACCCAGT TCGCCGATAG CAGCATTAAC CTCGAACTTG GCTTCTGGAT TGGCGACCCG GAAGAGGGCA AGGGCAACAT CGTTTCCGAC GTCAATTTCG CCATCTGGCG GGCCTTCAAG GCGCATGGTA TCGCCATTCC CTTCCCGCAA CGGGAAGTGA GAATGCTGAA CGAGACGAGG TAA
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Protein sequence | MSEKSPALRL INDLLADFRD PEFIWQVVAL VACLGLAFLV ARWWQGRHAE GAGRFSDAGS RLAFPISGMV LAGLTIATLG TLIHVNLLKL AMPLLGSMAL VRGVIFVLRQ AFPRATWLTA WERIIAATVW VWLALYITDL APYVIDAMEG VEFHVGKQHV DLWTILRAVA TIFLTVVFAL WIAGVIEAKL MRLHTLDANL RIVGVRVAKA GLTVIAILTS LALVGIDMTA LSVFTGALGV GLGLGLQKIA SNYVSGFIIL LDRSIRIGNI VQVGSDSGEV TQITTRYTVL KHSGGTEFIV PNETLIGTTV QNQTYSNTQI RLATTLGVAY DSDLDLACRL MTDAAAAHSR VLVEPAPKAF LTQFADSSIN LELGFWIGDP EEGKGNIVSD VNFAIWRAFK AHGIAIPFPQ REVRMLNETR
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