Gene Daro_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3150 
Symbol 
ID3568391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3388543 
End bp3389145 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content61% 
IMG OID637681621 
ProductRNA polymerase sigma factor 
Protein accessionYP_286350 
Protein GI71908763 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.117727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG GCCAGCAACC TCATCGAGTG GACACGCCCT TGGACCCCCT GCACGACCCC 
GAGTTTCTCA CAGACCTGCG TCGCGACATG CTGCGCTTTG CCGAGATGCA ACTGCGCAAT
CGGGCACAAG CCGAAGACGC AGTTCAGGAG GCGCTGACCG GCGCCCTGCT GGGGCGGGAA
AGCTTTGCCT CGCGGGCTTC CTTACGCACC TGGGTGCTCT CCATCCTAAA GAACAAGATC
ATCGATGTGC TGCGGGCCAA GGTTCGCGAA AATGTGGTCG CGGATGTCGA AAATGATGAC
GATCTGAACG CCTATTTCAA TGATCGCCAG CACTGGGCCG AAGATACCCG GCCATCGGAA
TGGCAGACGC CGCAGCAGGC GATGGAGAAC AAGCGTTTCT GGGAGGTTTT CGAGGCATGC
CTCTACCGCC TGCCGGATGC CAGCGCCCGC ATCTTCACCA TGCGCGAAGT GCTTGGTTTC
GATACCGACG AGATCTGCCA GACCCTGGCA ATCACCAGCA ACAACTGCTG GGTTCAGTTG
CACCGTGCCC GGCTGGCGCT GCGCGCCTGT CTCGGCGCCA ACTGGTTTGG CGAGGCAGCC
TAA
 
Protein sequence
MIPGQQPHRV DTPLDPLHDP EFLTDLRRDM LRFAEMQLRN RAQAEDAVQE ALTGALLGRE 
SFASRASLRT WVLSILKNKI IDVLRAKVRE NVVADVENDD DLNAYFNDRQ HWAEDTRPSE
WQTPQQAMEN KRFWEVFEAC LYRLPDASAR IFTMREVLGF DTDEICQTLA ITSNNCWVQL
HRARLALRAC LGANWFGEAA