Gene Daro_3143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3143 
SymbolrpmB 
ID3567644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3384342 
End bp3384575 
Gene Length234 bp 
Protein Length77 aa 
Translation table11 
GC content58% 
IMG OID637681614 
Product50S ribosomal protein L28 
Protein accessionYP_286343 
Protein GI71908756 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value0.00769008 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGAG TCTGCCAAGT AACGGGTAAA GCCCCGATGG TTGGGAACAA GGTTTCCCAT 
GCCAACAATA GAACCAAACG CCGCTTCCTG CCGAACTTGC AGTACCGTCG TTTTTGGGTC
GAATCTGAAA ACCGCTTCCT GCGTCTGCGT GTTTCCAACG CCGGCCTGCG CCTCATCGAC
AAGAACGGCA TCGACGCCGT CCTAGCCGAT CTGCGTGCTC GCGGCGAAGT CTGA
 
Protein sequence
MARVCQVTGK APMVGNKVSH ANNRTKRRFL PNLQYRRFWV ESENRFLRLR VSNAGLRLID 
KNGIDAVLAD LRARGEV