Gene Daro_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3110 
Symbol 
ID3568161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3352403 
End bp3353437 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content60% 
IMG OID637681581 
Productankyrin 
Protein accessionYP_286310 
Protein GI71908723 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTAA CTGCAAGACG ACGGCTTGCC ATGATAATCG GGATGGGACT GTTGCTAACA 
GCAACGACCC CGGTATTTTC AGAGGATAGG GCGAGATTGC CTGATCCGGT AGCCTTCACC
AACAGTATGG AACTTGGTGA CGTGCGCCAG GCCGAGGCAT GGCTTGATGC CGGAATGTCG
CCGGATTTCA TGGGTAGTCG GGTTGGATCC GGTCTGATGA TCGGCGCCTG GGAGGGCAAG
ATTGACCTGA TGCGCCTGTT TATTTCGCGC GGGGCCGATA TCAACAAGCT GAATGCCAAT
GGCGAAACGG CCATTGCCCT GGCCGCGTGG CGCGGCAATC TGGAGGCGGT GAAATGGCTG
CTGGAACGGG GGGCAAGAAT CAATGCCCCG AAGCGCCAGT GGTCGGCACT GCATTACGCC
GTGTTTGCCG GGCATGCCGA GGTGGCGGAT TACCTGATCG AGCAGGGAGC GGATATTGAT
GCTCAAAGCA CCAACGGTTC CAGCGTGCTG ATGATGGCTG TCTATGAAGG GCATCAGCAA
CTGGCGCGCA AACTGATCGA GAAGGGGGCT GACCGGACTC CGAAGAACGA GTGGGGGGAT
GGTGCCCTGG ATTGGGCAAT GCGGCACAAC CGCCTGGAAA TCGCCCGCAT GGTCAGCAAC
CCGGACGAGT TCAATATTGC GGTCAGCCAG CCGAAGGAGA AGTGGGGCGA GCCGACCCGT
TCGCTGCGGA CCTCGAAGGA TCTGGAGAGT TTGCTCAATA TTCGCGAGAC GCTCGTCAAG
CGGGGCATGG ATACCGCCGC GGTCGACAAG CGGATTTCCG TCGAGCGCAT GCGTATCGTC
CGGGCCGAAC TGGATCGCCA GTCCCCATCC CGGGCGGCGA CCATGGAAAT CACGGCCAGC
CGCAAGAAGC CGCAGGAACA ATCAGCGCAG ATCATCTACG ATGACAAGGG CAAGGCGGCA
GGCTACAAGG CGCCGGCAGC CACCTATTTC GGCACGCCAA AAATGCCGCC CAAGGGGCCG
GTGAAGAACT ACTGA
 
Protein sequence
MRLTARRRLA MIIGMGLLLT ATTPVFSEDR ARLPDPVAFT NSMELGDVRQ AEAWLDAGMS 
PDFMGSRVGS GLMIGAWEGK IDLMRLFISR GADINKLNAN GETAIALAAW RGNLEAVKWL
LERGARINAP KRQWSALHYA VFAGHAEVAD YLIEQGADID AQSTNGSSVL MMAVYEGHQQ
LARKLIEKGA DRTPKNEWGD GALDWAMRHN RLEIARMVSN PDEFNIAVSQ PKEKWGEPTR
SLRTSKDLES LLNIRETLVK RGMDTAAVDK RISVERMRIV RAELDRQSPS RAATMEITAS
RKKPQEQSAQ IIYDDKGKAA GYKAPAATYF GTPKMPPKGP VKNY