| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3087 |
|---|
| Symbol | |
|---|
| ID | 3566516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3327610 |
|---|
| End bp | 3329277 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637681558 |
|---|
| Product | Para-aminobenzoate synthase, component I |
|---|
| Protein accession | YP_286287 |
|---|
| Protein GI | 71908700 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
[COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00553] aminodeoxychorismate synthase, component I, bacterial clade |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 0.972054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.655519 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTGAAT GCCTCGAGGT CCGCGATAAC GCCTCGCTTG CAGAGGCATT GCAACGTCTG
GAAGATGAGC CAGCGTGGTC GGTCGCCGCT CTCGACTACG AATTGGGTTA CCTGTTGGAG
CCAAAGTCTG CGCCGCCAGA CTGGGTGCCA GGCGAGAAGC CGCTGGCCCG TTTCTGGCGA
TTCGCCAGAC GGCAGCCCCT GATGGCCGAT GCCGTCGAGG CTTGGCTGAA CAAACAGACG
GGCAAGGCGA TTGCAGGTGT GGGTGACCTG CATCCCATCA TTAGCGAACA ACATTATGTT
GCTGCGGTGG AGCGGATCAA GCAGTTGATA TTTGCTGGCG ACTGCTACCA GGTAAATCTT
ACCTTCCCGC TCGAATTCGA CTGGTTTGGT TCGCCGCTGG CGCTCTATGC CAGATTGCGC
GAACGACAGC CGGTACGTTA CGGTGGTTTT GTCGGGGATG CTTCACAGGG CCTGGTTTCC
CTTTCCCCCG AGCTCTTTCT CGAGCGCCTG GGCGACAGGT TGCTGACCCG GCCGATGAAG
GGGACGGCGC CACGTGGCGT GCCCGCCGAG CAACTGCGCA ATTCCGCAAA GGATTGTGCC
GAAAACCTGA TGATCGTGGA TTTGCTGCGT AACGATCTTG GCCGGGTGGC TGACAACGGT
AGCGTGGTGG TAGATCGTCT ATTCGAGATT GAGGATTACC CGACAGTCTG GCAGATGGTC
TCCGAGGTCT CTGCACGCGC AGGTCGCAGT AGTTTTGGCG AAATACTGCG GGCGCTTTTC
CCATGTGGAT CAATAACGGG TGCGCCAAAG ATTCGTGCCA TGCAGATTGC CGCCGAACTT
GAAGGCGCGC TGCGGGGCAT CTATACCGGG GCTTTTGGCT GGATCGCGCC GGATGGCGAC
TTTCGATTGA ACGTCGCGAT TCGAACGCTG GCGTTGCAAG CGGGTGGTCG GGGCAAGCTG
GGCATCGGCA GCGGTATCGT GGCCGATTCT CAGCCGCTGG CGGAGTGGCA GGAGTGTCAG
CTCAAGGCCA GGTTCCTGCG TGAATGCGAT CCGGGCGTGT TGCTGATCGA GACGCTGCGT
CGCGAGGAAG GCAGTTATCC GCGTCTGGCT GGGCATCTGG CTCGCCTGCG CCAGTCGGCG
GCTTGGCTGG GCTTTCCTTA TGACGAACAG CGAGTCAAGG ATCTACTGGC CGAACAGCCG
GAGATCGGCT TCTGGCGGGT GCGTCTGACG CTGGCTAAAG ATGGCCGGCT AGATGTGCAG
TCGTTTCCTC TGGCGGGTGA GCCTGATGTT CTACGCCAAG CATTGTTGGC ACCGGAGCCG
ATTTGTTCGA CTTACCCCTT GCGCCGACAC AAGACGACTG ATCGTGCGGT ATACGATGAA
GCGATCCGTG CTCTGGCGGG CGATCAGCAA TTGTTCGACG TGGTTTTTCT GAACGAGCGT
GGTGAGGTCG CCGAAGGGGC GCGTAGCAAC GTATTTGTCG AACGGGATGG CGTGTTCCTG
ACGCCACCTC TGGCGAGTGG CGCCTTGCCC GGTGTGTTGC GGGCTGAACT GCTGGCCGAT
GGGCGGGCAC GTGAAGCCGT CTTGTGGCCG GAAGATCTCG ACAGGGGATT CTACTTGGGC
AATGCCTTGC GCGGCCTGAT TTGGGTATCC CTACGGACCG ACGCCTGA
|
|---|
| Protein sequence | MIECLEVRDN ASLAEALQRL EDEPAWSVAA LDYELGYLLE PKSAPPDWVP GEKPLARFWR
FARRQPLMAD AVEAWLNKQT GKAIAGVGDL HPIISEQHYV AAVERIKQLI FAGDCYQVNL
TFPLEFDWFG SPLALYARLR ERQPVRYGGF VGDASQGLVS LSPELFLERL GDRLLTRPMK
GTAPRGVPAE QLRNSAKDCA ENLMIVDLLR NDLGRVADNG SVVVDRLFEI EDYPTVWQMV
SEVSARAGRS SFGEILRALF PCGSITGAPK IRAMQIAAEL EGALRGIYTG AFGWIAPDGD
FRLNVAIRTL ALQAGGRGKL GIGSGIVADS QPLAEWQECQ LKARFLRECD PGVLLIETLR
REEGSYPRLA GHLARLRQSA AWLGFPYDEQ RVKDLLAEQP EIGFWRVRLT LAKDGRLDVQ
SFPLAGEPDV LRQALLAPEP ICSTYPLRRH KTTDRAVYDE AIRALAGDQQ LFDVVFLNER
GEVAEGARSN VFVERDGVFL TPPLASGALP GVLRAELLAD GRAREAVLWP EDLDRGFYLG
NALRGLIWVS LRTDA
|
|---|
| |