| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3085 |
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| Symbol | valS |
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| ID | 3566514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3324199 |
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| End bp | 3327030 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637681556 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_286285 |
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| Protein GI | 71908698 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.405108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG CCAAAGCCTT TGAACCAGCC GATATCGAAC GCCGCTGGTA TCCCGAGTGG
GAAACCCAGA ATTATTTCGC CGCCGGCGTA GACGCCAGCA AGGCCGACAA TTTCTGCATC
CTGCTGCCAC CGCCGAATGT TACCGGCACG CTGCACATGG GTCATGGCTT CAACCAGACG
ATCATGGACG CGCTGACCCG CTATTACCGG ATGCGCGGCC ACAACACGCT GTGGCAACCC
GGTACCGACC ACGCCGGTAT CGCGACGCAG ATCGTCGTCG AACGCCAGCT GGACGCCCAG
GGCATTTCGC GCCACGATCT CGGCCGCGAG AAGTTCCTGG AAAAGGTCTG GGAATGGAAA
GAATACTCCG GCAACACCAT CACCAAGCAG ATGCGCCGCA TGGGCACCAG CCCGGACTGG
AAGCGCGAGC GCTTCACGAT GGATGCCGGT CTCAACAAGG TTGTCACCGA AACCTTCGTC
CGCCTGTTTA ATGAAGGCCT GATCTACCGT GGCAAGCGCC TGGTGAACTG GGACCCGAAG
CTGAATACTG CCGTTTCCGA CCTCGAAGTG GTGCAGGAGG AAGAAGACGG CTTCATGTGG
CATATCCGCT ATCCGCTGGC TGATGGCAGT GATAGCCTGG TGGTCGCCAC GACACGGCCG
GAAACCATGC TCGGCGACAC CGCCGTGATG GTGCATCCGG AAGACGAGCG TTACAAGCAC
ATGATCGGCC AGATGGTGAA GCTGCCGCTG ACCGATAGAG AAATACCGAT CATCGCTGAC
AGCTACGTCG ATCTCGAATT CGGCACCGGT TGCGTCAAGG TCACGCCGGC GCACGACTTC
AACGACTACG CCGTCGGCCA GCGCCACGGC CTGCCGATGA TTTCCATTCT GACGCTGGAT
GCCAAGGTCA ACGAGAACGC CCCCGAGAAA TACCGCGGCC TGGATCGTTT CGATGCCCGC
AAGGCTGTCG TCGCCGACCT CGAAGCACTC GGCATCCTGG AAAAAACCGA CAAGCACAAG
CTCAAGGTGC CGCGCGGTGA CCGGACCAAT GTCGTGATCG AGCCGATGCT GACCGACCAG
TGGTTCGTCG CGATGAGCAA GCCGGGCGAC GACGGCAAGT CGATCACCGA GAAGGCACTC
GACGTCGTCC ATTCCGGCGA GATCAAGTTC TATCCGGAAA ACTGGGTCAA TACCTACAAC
CAGTGGCTGA ACAACATCCA GGACTGGTGC ATCTCCCGCC AGCTGTGGTG GGGCCACCAG
ATTCCGGCGT GGTACGGTGA TAATGGCCAG ATTTTCGTTG CCCACAGCGA AGCCGAAGCC
AAGGCCGAAG CTGCCAAGCA GGGTTACACC GGCACTCTCA AGCGTGACGA AGACGTTCTC
GACACCTGGT TCTCTTCAGC CTTGTGGCCG TTCTCGACAC TGGACTGGAC GGGCGATGAG
GCGATCGATG CCGCCAACCC GCTGCTCAAG CAATACCTGC CCTCCTCGGT GCTGGTCACC
GGTTTCGACA TCATCTTTTT CTGGGTCGCC CGCATGGTCA TGATGACCAA GCAGATCACT
GGCCAGATTC CGTTCAAGCA CGTTTATGTG CACGGCCTGA TCCGTGATGG CGAAGGCCAG
AAGATGTCCA AGTCCAAGGG CAACGTGCTC GATCCGATCG ACCTGATCGA TGGCATCGGC
CTCGAAGCGC TGATCGAGAA GCGTACAACC GGCCTGATGA ACCCAAAGCA GGCGGAAAGC
ATCGCCAAGA AGACGAAGAA GGAGTTCCCG GAAGGCATCG CCTCGTTCGG TACCGATGCG
CTGCGCTTCA CCTTCGCCAG CCTCGCCTCG CCCGGCCGCG ACATCAAGTT CGACCTCAAC
CGCTGCGACG GCTACCGCAA CTTCTGCAAC AAGCTGTGGA ACGCCACGCG CTTCGTACTG
ATGAACGTCG AAGGCCACGA TCTGGCCCTC GAACACCAAC AGAACGGCCC AGCCTGTGGC
GGTTCGGCTC CGCTCGAATT CTCCTTCGCC GACCGCTGGA TCGTCAGCCA GTTGCAACGC
GTCGAGCAGG AAGTCGAACA GCACTTCACC GACTACCGTT TCGACCTGAT CGCTCAGGCC
ATCTACAAGT TCATCTGGGA CGAGTTCTGC GACTGGTATC TGGAAATCGC CAAGGTCGAG
ATCCAGACCG GCAACGACGC CCAGCAGCGC GGCGCCCGCC GGACGCTGGT GCGTACGCTG
GAAGCTGTGC TGCGTCTGGC TCACCCGCTG ATTCCGTTCA TCACCGAAGA ACTGTGGCAA
ACCGTCGCCC CGATCGCCGG CCGCAAGACG CACGACTCGA TCATGCTGGC CGCCTACCCG
CGTGCCGAGG AATACAAGAT CGACGCCGCT TCGGAAGCAA AAGTCGAGCG CCTGAAGGCC
CTGGCCTATG CCTGCCGCAA CCTGCGCGGC GAGATGAACG TCTCCCCGGC CCTGCGCATG
CCCCTGCTGG TTGCTGGTGG CGGCGCTGAA ATTTCCGAGT TCGCAGCCAT CCTGCAAGCT
CTGGGTAAGC TCTCCGAGGT ACAAATCGTA GACGACATGC CGGCCGATGC GATGGCGCCG
GTAGCCGTGG TCGGTGAAAC CCGACTGATG CTGAAGGTGG AGATCGACGT TGCCGCCGAA
CGCATTCGTC TGGCCAAGGA AATCGAAAAG CTGGAAAAGC AGATTTCGAT TGCCCAAGGC
AAGCTGGCCA ACGAAGGTTT CGTCGCCCGC GCCCCGGCAG CGGTCATCGA TCAGGAAAAG
CAGCGCGTCG CCGATTTCAC GGCAACGCTG GAACAACTTA AACCACAACT GGCCAAGCTC
GGCCAGGCAT AG
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| Protein sequence | MELAKAFEPA DIERRWYPEW ETQNYFAAGV DASKADNFCI LLPPPNVTGT LHMGHGFNQT
IMDALTRYYR MRGHNTLWQP GTDHAGIATQ IVVERQLDAQ GISRHDLGRE KFLEKVWEWK
EYSGNTITKQ MRRMGTSPDW KRERFTMDAG LNKVVTETFV RLFNEGLIYR GKRLVNWDPK
LNTAVSDLEV VQEEEDGFMW HIRYPLADGS DSLVVATTRP ETMLGDTAVM VHPEDERYKH
MIGQMVKLPL TDREIPIIAD SYVDLEFGTG CVKVTPAHDF NDYAVGQRHG LPMISILTLD
AKVNENAPEK YRGLDRFDAR KAVVADLEAL GILEKTDKHK LKVPRGDRTN VVIEPMLTDQ
WFVAMSKPGD DGKSITEKAL DVVHSGEIKF YPENWVNTYN QWLNNIQDWC ISRQLWWGHQ
IPAWYGDNGQ IFVAHSEAEA KAEAAKQGYT GTLKRDEDVL DTWFSSALWP FSTLDWTGDE
AIDAANPLLK QYLPSSVLVT GFDIIFFWVA RMVMMTKQIT GQIPFKHVYV HGLIRDGEGQ
KMSKSKGNVL DPIDLIDGIG LEALIEKRTT GLMNPKQAES IAKKTKKEFP EGIASFGTDA
LRFTFASLAS PGRDIKFDLN RCDGYRNFCN KLWNATRFVL MNVEGHDLAL EHQQNGPACG
GSAPLEFSFA DRWIVSQLQR VEQEVEQHFT DYRFDLIAQA IYKFIWDEFC DWYLEIAKVE
IQTGNDAQQR GARRTLVRTL EAVLRLAHPL IPFITEELWQ TVAPIAGRKT HDSIMLAAYP
RAEEYKIDAA SEAKVERLKA LAYACRNLRG EMNVSPALRM PLLVAGGGAE ISEFAAILQA
LGKLSEVQIV DDMPADAMAP VAVVGETRLM LKVEIDVAAE RIRLAKEIEK LEKQISIAQG
KLANEGFVAR APAAVIDQEK QRVADFTATL EQLKPQLAKL GQA
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