| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3081 |
|---|
| Symbol | |
|---|
| ID | 3566510 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3320653 |
|---|
| End bp | 3321735 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637681552 |
|---|
| Product | permease YjgP/YjgQ |
|---|
| Protein accession | YP_286281 |
|---|
| Protein GI | 71908694 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 0.770978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0713723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATTCG AGCGCGCCGC CCGGCGCGAA TTTGCCCAGG CAGCTGCCGG CATCAGCGTT
GCGCTGCTGG CTATTCTGAC CTCCACTAAT CTGATTCGTC TGCTCAAGGA AGCGGCCGGC
GGCCGAATCG CGCCTGAAGC GGTCGCTTCT CTGCTGGGAT TCTCGGCGCT GAACTTCATG
CCGGTGCTTC TCTCGCTGAC GCTTTTTGTC TCCGTTCTGC TGAGTTTGTC TCGGGTTTAC
CGGGATTCGG AGATGGTGGT CTGGTTCTCT TCCGGTCTGC CTCTGACAGG GTGGGTTTCC
CCCGTCTTGA GATTTGCTGC ACCGATCGTT ATTGCGATTG CCGTGGTTTC AGGTTTTCTG
GCGCCATGGG CCAATTCCAG TTCTGCGGAG TACCGGGAAA AGCTTTCTGC CCGAAGCGAA
CTGTCTCAGG TTTCCCCTGG CGCCTTCCGT GAGGTCAAGA AAGGACAGCG CGTATTTTTT
GTTGAGGGCG TCGAGGGGGA TGGTAGCCAC GTTGGTAACG TCTTTGTTGC GTCTTATCAG
GAAGGCAAGC TTGGGGTCAT CATGTCGGAC TCCGGCTACC AGGAGGCTTC AGGAAATGGC
GACCGCTTCG TGGTTCTTGA GCACGGGCGC CGCTATGAAG TTGAGCCGGG TACCCCTGCC
TTCAAGGTGA TGGAATTCGA GCGTTATCGA GCCCGGGTCG AGGATGGGGA GCCTTCTCCT
TCCGACGTGT CGCCAAAAGG AATGCCGATT ACCCGACTGG TGCTTGAAGA TAGCAATCCG
GCTCGGGGTG AATTGCTTTG GCGGGTTGGC CTGCCGGTAT CTGCATTGGT CCTCTGCTTG
CTGGCAATCC CGCTTTCCTA TGTCAATCCG CGGGCCGGTC GTTCCGCCAA TATGCTGATA
GCCATCCTGG TCTACGCCAT TTACAACAAT CTGTTGTCGG TCAGTCAGGC CTGGGTGGCG
CAGGGCAAGA TGTCGTTCTG GGTTGGCCTC TGGGCTGCGC ATGTCTTGAT GCTGTTGCCG
CTGGTGTTGC TCTTTTACCG GCGAATAGCC GTTCGTATGC CGTGGCAGAG GTGGGGCGCA
TGA
|
|---|
| Protein sequence | MIFERAARRE FAQAAAGISV ALLAILTSTN LIRLLKEAAG GRIAPEAVAS LLGFSALNFM
PVLLSLTLFV SVLLSLSRVY RDSEMVVWFS SGLPLTGWVS PVLRFAAPIV IAIAVVSGFL
APWANSSSAE YREKLSARSE LSQVSPGAFR EVKKGQRVFF VEGVEGDGSH VGNVFVASYQ
EGKLGVIMSD SGYQEASGNG DRFVVLEHGR RYEVEPGTPA FKVMEFERYR ARVEDGEPSP
SDVSPKGMPI TRLVLEDSNP ARGELLWRVG LPVSALVLCL LAIPLSYVNP RAGRSANMLI
AILVYAIYNN LLSVSQAWVA QGKMSFWVGL WAAHVLMLLP LVLLFYRRIA VRMPWQRWGA
|
|---|
| |