| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3068 |
|---|
| Symbol | |
|---|
| ID | 3566243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3310009 |
|---|
| End bp | 3310836 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637681539 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_286268 |
|---|
| Protein GI | 71908681 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 0.0617893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000205961 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCCC GAAATCGCCG TAATCCCCGC AAGCCTCCAG GTGCAGGTGG TGTCTTTCAT
CGCTTCTATG GCGAGAACAT GATGCAGACC AGTGCGGCGC TGGCTTTTAC GACATTGATG
GCGTTGGTGC CACTGGTCAC AGTCGTCCTG TCGGTGGCTC ATGCCGTCCC CTATCTCGAT
CTGGTCGTGG CTCGCCTTGA CTTGATGGTG CGCGAGGCGT TGTTGCCAGT CGGGGCCGCG
GGAGCGATTG TCGGCAATAT CGGCAAGTTT TCGCAGAAGG CCCAGAATCT GACCCTGGTT
GGCCTTGGGG GGCTCAGTGT GACGGCCTTT CTGCTGATGA ATACCATCGA GCGGGCTTTC
AACCATTTGT GGCGGGTAAG TCCGCGCCCC ATCCTGGCGC GTTTGCGGCT CTATGCCTTC
GTTATGGCGG TATGGCCATT TGTGCTGGGC GCGGTGGCAG GGGTAATGTC ATTTGCCATC
ACGTCCTCGC TTGGGCTCTT TGATGAACCG ATGTGGTTTC GTCGTATCGC CCTCAAGGTG
CTTGCGACCG TGCTGCTTGG CTTGTTTTTT TCGTTTTTGT ATTACGCGGT ACCAAATGCC
GAGGTTTCAA GGCGGGCGGC GCTGGTCGGT GGCGTTTTTG CTGCGCTGGC GTTTGCGGCC
ATGCAGAAAG TTTTCGAGTT GTTTCTGGTC AGTTCGGCCA TGCTGAAAAG CATCTACGGT
GCTTTCGCTG CCTTTCCCGT ATTTCTGGTC TGGCTGCATC TCTCTTGGGC GGTGGTGCTT
TTTGGTGGCT TGCTTGCGGC TAGCGTGAAC CGTCCGGGGA AAGGCTGA
|
|---|
| Protein sequence | MRSRNRRNPR KPPGAGGVFH RFYGENMMQT SAALAFTTLM ALVPLVTVVL SVAHAVPYLD
LVVARLDLMV REALLPVGAA GAIVGNIGKF SQKAQNLTLV GLGGLSVTAF LLMNTIERAF
NHLWRVSPRP ILARLRLYAF VMAVWPFVLG AVAGVMSFAI TSSLGLFDEP MWFRRIALKV
LATVLLGLFF SFLYYAVPNA EVSRRAALVG GVFAALAFAA MQKVFELFLV SSAMLKSIYG
AFAAFPVFLV WLHLSWAVVL FGGLLAASVN RPGKG
|
|---|
| |