| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3060 |
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| Symbol | |
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| ID | 3566235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3302766 |
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| End bp | 3303659 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637681531 |
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| Product | farnesyl-diphosphate synthase |
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| Protein accession | YP_286260 |
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| Protein GI | 71908673 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.016258 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000723246 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCATCA AGCCCTTCGC CGAATGGATG GCGGTCACCC AGGACCGCGC AGAATCCGCG
CTCGGCCGCT TTTTGCCCGG CCCCGACTGC ATTCCCGCCC GCCTGCACGA AGCCATGCGC
TACGCCACCC TCGGCGGCGG CAAGCGCGTC CGTCCGCTGC TCGCCCACGC CGCCGGCGAA
TTGACCGGTG CGACGCCGGA GGCCCTCGAC ATCGTCGGCT GCGCCGTCGA AATGATCCAC
GCCTATTCGC TGGTCCATGA CGACCTGCCG TGCATGGACG ATGACGTGCT GCGCCGCGGC
CGTCCGACCT GCCACGTCGA ATTCGACGAA CCGACCGCGC TGCTCGTCGG TGACAGCCTG
CAGACCATGG CCTTCGAACT GCTCGCCAGC CAGCCGCTTG GCGAACCGAA GCAACAACTC
GAAATAATCG CCCTGCTCGC CCACGCCAGC GGTTCGCGCG GCATGGCCGG CGGCCAGGCC
ATCGACCTCG CCTCGGTCGG CAAACCGCTG ACCCAGCCCG AACTCGAACT GATGCACGCG
CTGAAAACCG GCGCCCTGAT CCGCGCCGCC GTGTTGCTTG GCGCCCTGGC TGGCCAGCCC
CTTTCGGCCG ACGAACGAAC CAGCCTCGAC CGTTTCGCCA AGCGCGCCGG CCTGCTCTTT
CAGGTGGTCG ATGACATCCT CGACTGCACC GCCAGCACCG CTACGCTGGG CAAGACTGCC
GGCAAGGACG AGGCGGCCGA CAAACCGACC TACGTCGCCC TGCTCGGCCT TGACGCGGCC
CGCACCTACG CCGACGAACT GCGCGCCGAC GCCCGCGACG CCCTGAGCAT CTTCGGCGAG
CGTGCCAGCC GCCTCAATCA GTTGGCCGAC TTCATCTGCC ACCGGCAATT CTGA
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| Protein sequence | MSIKPFAEWM AVTQDRAESA LGRFLPGPDC IPARLHEAMR YATLGGGKRV RPLLAHAAGE
LTGATPEALD IVGCAVEMIH AYSLVHDDLP CMDDDVLRRG RPTCHVEFDE PTALLVGDSL
QTMAFELLAS QPLGEPKQQL EIIALLAHAS GSRGMAGGQA IDLASVGKPL TQPELELMHA
LKTGALIRAA VLLGALAGQP LSADERTSLD RFAKRAGLLF QVVDDILDCT ASTATLGKTA
GKDEAADKPT YVALLGLDAA RTYADELRAD ARDALSIFGE RASRLNQLAD FICHRQF
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