Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3049 |
Symbol | |
ID | 3568253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3293633 |
End bp | 3294982 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637681520 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_286249 |
Protein GI | 71908662 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 0.429243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0314787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAC GCGCTCATCC CAACCTTGGG CGCCGACAGC TTCTCCGTTA TGCCGGCGCC TCACTGATCC TTTCCGTTTC GCCGATTGCC GGTGCCGCGG CCAAGTTGCC GTCTGTCCTC GCCGTGCGTA TATGGCCGGC TGCCGATTAC ACCCGTGTCA CCCTCGAACA CGACGCACCG CTTAAATTTA CCCATTTCAT TGTCGAGAAC CCGGATCGAC TGGTCGTTGA TATCGAAGGG GTCGAGTTCA ACAGTGTCCT TGATAGCCTT GCCCGCAAGG TGGCGACTGA CGATCCGAAC ATCAAGCTGT TACGCGCCGG TCGCTTCAAG CCAGGTGTCG TTCGCTTGGT CATGGAGCTG AAGGGCAAAG TTAATCCGCA GGTCTTCACG CTGGAGCCGG CAGGCGAGTA TGGCCGTCGT CTGGTGCTTG ACGTCTATCC AGTCAACCCG CCGGACCCGA TGATGGCGCT GCTCGAAGGG CGCAAGGACG CGGTTGAGCC GCTGAAGAAT GAGCATGATT TCCAGATCAC TGAAAAGCGG CCCGATGAAG TTGCCGCCAA GATTCCGGAA AAACCGATCG AGGCACCTGA GGTTCAGACC AGCAAGAAGT CCGGCAAGCC GATTGTCGAT CGCCTGGTCA CCATCATGCT CGACCCCGGC CACGGTGGCG AAGATCCCGG TGCCATCGGC AAGGCGGGAA CCTACGAAAA GAATGTCACG CTGGAAGTAG CTCGCCGCCT GAAGGCGCGA ATCGATGCCG AGCCAAACAT GCGCGCGGTG CTGACGCGTG ATTCCGATTT CTTCGTGCCG CTACAGATGC GCGTCCAGAA GGCCCGCCGA ATCCAGTCCG ATCTCTTCCT GTCGATTCAT GCCGATGCCT GGATCAAGCC GGATGCCAAG GGTTCATCGG TGTTCGTGCT GTCCGAAAAG GGGGCCTCCA GCACCCAGGC TCGCCTGCTC GCCCAGAAGG AGAATCAGGC CGACCTGATT GGCGGGGTAA ATATTGGTAG CAAGGATCTA TTTCTGGCCC GTACGCTGCT CGATCTGTCG CAGACCGGGA CGATCAACGA TAGCCTGAAG CTGGGCAAGT ACCTGCTGGG TGAACTCGGG GCGATCAATA CGCTGCACAA GGCGAACGTT GAACAGGCCG GTTTTGCCGT GCTCAAGGCG CCGGACATCC CGTCTGCGCT GATTGAAACG GCGTTCATTT CCAATCCGGA AGAAGAAAGC CGGCTGAACG ACGATGCGTA TCAGGAAAAA CTGGCCGGAG CGATCGTGCG CGGTATCAGG CAGTATTTCA TCAAGCATCC GCCAGGGCCA AAGTCCAAGC TGGCCGCGCT CGGCTGGTGA
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Protein sequence | MSKRAHPNLG RRQLLRYAGA SLILSVSPIA GAAAKLPSVL AVRIWPAADY TRVTLEHDAP LKFTHFIVEN PDRLVVDIEG VEFNSVLDSL ARKVATDDPN IKLLRAGRFK PGVVRLVMEL KGKVNPQVFT LEPAGEYGRR LVLDVYPVNP PDPMMALLEG RKDAVEPLKN EHDFQITEKR PDEVAAKIPE KPIEAPEVQT SKKSGKPIVD RLVTIMLDPG HGGEDPGAIG KAGTYEKNVT LEVARRLKAR IDAEPNMRAV LTRDSDFFVP LQMRVQKARR IQSDLFLSIH ADAWIKPDAK GSSVFVLSEK GASSTQARLL AQKENQADLI GGVNIGSKDL FLARTLLDLS QTGTINDSLK LGKYLLGELG AINTLHKANV EQAGFAVLKA PDIPSALIET AFISNPEEES RLNDDAYQEK LAGAIVRGIR QYFIKHPPGP KSKLAALGW
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