Gene Daro_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3042 
Symbol 
ID3568246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3286064 
End bp3286624 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content53% 
IMG OID637681513 
Producthypothetical protein 
Protein accessionYP_286242 
Protein GI71908655 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.145251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTTGT TCACGGCGAA TTATCTCGAA CAAAGCTTAA CAACCAGCCG AGGCCCCCTT 
CCCCGCCTAT CAGTAGACCT GAAAAACTCG GCAGAAATCA GCAGCCCCGA CCCCGTTCGC
AGTCTCCCGC TTCCCATTAC AAAAACAGAC CGCCCCAAGG CTTCCCCCGC CATCACCAAG
GAAATAGGCA ATGCCGGTAG CGCCCCGGCT TCACAGGAAA GGGCCCCCAA ATTTTTTTTC
GACCCGTACT ATGTGGATGA AATAGCCTTC GCCCTCAGCG TGCCGGAATT ACCGCTTCCC
ACAAACGAAG AAACAGTGTC CGGTTCTTTG CAAATAAAGG TCTTTATCGA CACACGCGGA
GTTCCGGATG AAATAGAAAT CGTCCAGAAC ACGCTGCCGG ATGACTACGT CGCCAGTTTG
ACTAATGCCT TCAGCAAGGC AAAATTTCAA CCAGCCTTAC GCGGAGGAGT ACCGGTAAAC
AGCTGGCGAG TGATAGAAAT CACCTACGGT GACAAGGAGC CCCCCCAATT GGATGAAGGC
ACCAAAAAGG AAAGCCAATA G
 
Protein sequence
MLLFTANYLE QSLTTSRGPL PRLSVDLKNS AEISSPDPVR SLPLPITKTD RPKASPAITK 
EIGNAGSAPA SQERAPKFFF DPYYVDEIAF ALSVPELPLP TNEETVSGSL QIKVFIDTRG
VPDEIEIVQN TLPDDYVASL TNAFSKAKFQ PALRGGVPVN SWRVIEITYG DKEPPQLDEG
TKKESQ