Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3036 |
Symbol | |
ID | 3568240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3278079 |
End bp | 3282713 |
Gene Length | 4635 bp |
Protein Length | 1544 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637681507 |
Product | putative Tfp pilus assembly protein tip-associated adhesin PilY1 |
Protein accession | YP_286236 |
Protein GI | 71908649 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.583565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.438129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCTT CTGCGCACCA TAACTCGGTT ATTCGTCAGG CCCTGAGTCT GCTAATCGTT TTTCAGCTTG GATTTTCTTC CCCATCGCAT GCTGCTTCGA TTGCGTTGGC CAGTGCACCA CTGGCCAACT CGACCACCAC CACTGTGTTG CCCAACCTGA TGTTCCTAAT GGATAACTCA GGCAGTATGA GTCAGGACTT TACGCCTGAC TACATGATGG AATACAACTG GCGTAACAGC CCATGGACGT CGAATGGCTG GAATGCTCCA GACCCTGTTC AGAAGAACTG TCGTGATAGT GCGGATGACG ATGGGTCGGT AACTACTGCG TTGGCAGATC TGGATTTGTG CGTCGTCGGT GACGTGCCCT ATATGACAAG CTCCATTAAT TCGCAGTATT ACAACCCGGC TATCAGATAT TTGCCGGGAG TGTTATCCGA TGGTGTCAGC AAGCCGAGCC AGACTGACCC GACCAATGTT TTGCTGGATG GCTATGGCAA GCATAACCAG ACACAACTTG GTGTTGCCGG CACGGCAATC GATTTGACCA CGAACTATCC TGACCGAGTC TGGTGTACCA AGAACAATCC AACTGCGGCC GAATTGGCGG ATACCTCGGT TTGTCGGAAG AACAGCGACT ACCTTTATCC GAATGCAACG TACAAATACG GGCGAAATAA TGATGGCACG ACGGCCAACA AGGATGTGCT CGGGGTCATG GGGGCTCCTT ATTACTATCA AGTTGTCGTC AGCGAGTATT GTAAAGAGGC CGAGTTGCGG AACTGCACTA CTTCCTCGGT AGCCACGGGG GACTACATCT TCCCTGCCAA ATCACGTTGG TGTTCTGATA CGGCATTGAC GACCTGTCAA TCTACTAAAA CCTCAACCTA CAAATACCCA CGTTATGTGG GAGCGTCAAC GGTGGCTGTG GCGGCAAGTG GGATAATCCA GGCTACTAAC ACGACGCCTC GCACCATTAG TAGCATCACC GTAAATGGTG TGGAAATTCT TGGCGCACTG GTCACTGGCA CTAGTCAGAT TGACCTAGCG TCCAAGGTGG CGACTCAGAT CAACGCCTAT GCCTCCAATC CGGAGTATTC GGCAGCTCTT TATGGCGATA ATACATACGT AAAAATTACT TCGACCGCAG CGGCTGGTGC AAGCGCAAAT GGTACGGTGG TTATTACCGG CAGAGGTATT GTTACCAGCA ACGTTTCTGG CGGAGTGACT GGCTTCTCTG CTGCGCCATA TTCTTTCGCA CGTACCGATA TCGTTCCGGC GACAACCAGC TATCCCAAGG CGACCTCACG CACCGACTGT ACGGGTGCTA CCTGTACGTA TGCTGATGAG GTGACCAATT TTGCCAACTG GTATGCCTAC TACCGGACTC GGATGCAGTC TATGAAGAGT TCTGTCAGTC TTGCCTTCCG GCCAATTGGT TCGAATTACC GTGTTGGTTT TATGAATATT TGTAAAGGGA GCTATCTACC GGTCGCGCCT TTCGATAATT CGGATTCCCT GATTGGTGCT GTGGCTGCGA GTGGTACTTT CCGCTTCAAC AGCTTTACAG CAGGCGTCAT GCAAACGGTT ACTAGTATCA AAGTAAATGG TATCGAGATT CTTGGGGCTA CAGTCACTTC CAATGTCAGT CGAGCCGATT TGGCGACGAA GTTGGCTGCT CAGATCAACG CCTTTTTATC ATCGCCTGAG TACACTGCAG TGGCGAATTC AGGTGGTAGC AATGGCTTGG TAACGCTGTC AGGAAGTATC GGTGATGGAG CTGGTTCCAA CGGTACAATC GTGGTAACTG GCGGCCCTTC GCTGAGTACC AATGCCGGGG TAAGTGGTGG CGTGACTGGC TCTGGGCAGA AGTCTAAATG GTATGAAACC TTGTTTGACC AGACGGCGGT AGGTTGCGGC ACGCCGCTGC GTTCGGCGCT TGCTACCACT GGCCGCATTT TTGCCGGTAA GGAAATGTCG TCTGCAGGTT CGACCTCTGG TTCGACGATT GACCCTGTTC AGTATTCTTG CCAACAGAAC TTTACTTTGT TGACGACAGA CGGATACTGG AACGGTGCTG GCGGTACAGA TCTTGATGGC GTCGCCATGG GTAATCTGGA TGGTGGTACA ACGCCTCGCC CGATGTTCGA GGGCAACACA GCTACTGGCA CCCTTGCCGA CGTCGCAAAA TACTACTACG ACACCGATTT ACGAACGAGT GGCCTGAGTA ACTGCACAGG TTCGCTCGGT ATTGATGTCT GTGAAAACAA TGTCTTTGTC AGCAGTACTG ACAACAACCT CAAGCAGCAC ATGACGACCT TTACGCTTGG TCTTGGTGTG GATGGTACGT TGTCATATGT TTCAGACTAC AAAAATGCGA CAACAGGTGA TTTTTACAAT TTGAAGGAGG GTTTGGGGTC GCCTGTGGTT AATTGGCCCG TTCCTGTTGC GGATAACGAA ACAGCAGTGG ATGACTTGTG GCATGCGGCC GTCAATGGTC AGGGAACTTA CTTTAGTGCC AAAGACCCTG CGCAGTTGGC CTATGGCCTT TCAACGGCGC TCAATCAAAT TGGCTCCAAG GTTGGTGCGA CGTCAGCGGC GGCTACTAGC ACTCTTAATC CGGTTGCCGG AAACAATTTC GCCTATGTCG CTAGCTATAG CTCGGTGAAG TGGACCGGTA ATCTGGAGGC GCGAACGATC AATACAACGA CCGGCGTCGT CAGCGAAACT GCCGCATGGT GCGTACAGAG CATCAGTGCT GGAACGTGCG CCTTGCCAAG TACGATTGTG ACGGAGGATA CCGGAAGTAG TACGGTCACT TACTGTGTAA CTTCCGGGGC AACTGCTGCC TCTTGTACTG ATGGCATTCT GGATGGAACA AACTGTAAGG TTCAATTGCC TACCAGTTGT GTCGGTACGA TGAACAGCAA GGTCGATAAG TCCAGCGACT CAAGGACTAT CTATAAAGCC AACGCATCCG GAGCCTTGGA AAGTTTTATT TACGCCAATC TCGACTCCTC GTTATTTACG GGTACAGGGC TGAGTCAATG GTCAGTATTG ACCGCCTCTC AGAAAACCGT GGCTGCGGGG GAGAACCTGG TTAATTTCCT GCGTGGCCAG ACTGGATATG AGGATAGAAC TAGTAACCCT GTTGATAATC GGCTGTATCG GATGCGCGAG GCAACGATGG GCGATGCTCT GGAGTCCCAG CCGTTCTTTA TCAGCAAGCC GGTATTTAGT TACGCCGATG CGGGCTATGC CAAGTACAAA ACGGATTTTG CTTCACGAGC TGGCTCCGTC TATATGGGGA CCAATGATGG GATGTTGCAC GCTTTTGCTG CCGATACCGG TGTTGAGCGC TGGGCTTATG TTCCAACGGT TGTGATTCCC AACCTTTGGA AACTTGCCGA CAAAAATTAC GCTACTGGGC ACGCAAACTA TGTGAACGGT AGCCCGGTTA TTTCGGATAT TTGTACGGCT AATTGCAGTT GCGATGATGC TTGTGTTTCT GGCGGTGGGA CGGCCCCGGT GTGGAAGACC ATCTTGGTTG GTGGGTTAAA TGCAGGGGGG AGGAGTTTCT ACGCCTTGGA TATAACAAAT CCTGCGTCTC CGTCGTTGTT GTGGGAGGTT TCGTCAAGTA CGGCAGGGTT TACCAATCTG GGTTATAGCT TTGGTCACCC TATTATTACC AAGAAGTCCG ATGGAACTTG GGTTGTTTTG ATAACGTCGG GGTATAACAA TACGAGCCCC GGTGATGGCA AGGGTTATTT ATATGTGCTT AATGCAGGCA CTGGCGCACT TATCGCTGCA ATAGGAACTA CGGTTGGTGA TACAACGACA CCGAGTGGCT TGGCAAGGGT CTCGGCTTGG AATGACTATG GTGGCGTTAA TAACACAGCC GGCTATGTTT ATGGTGGTGA TTTGCTTGGC AACCTCTGGC GTTTTGATAT CAATGCTGAA AGCGTGAACA AGTTTGCGAC ATTGCTTGAT TCGTCTGGTA AAGCACAACC AGTGATGACC AGTCCGACTT TGGGGTTGAT CAGCGGAAAG AGAGTGGTCT TCGTCGGGAC TGGTAAATAT TTGGAAGTAT CAGATCTGAC AAATACCGAT TCGCAAACTA TTTATGCAAT TAGCGACGAT AACAGCGGCA CGACTTTGGT CAATGCTAGG ACTGTGCTGG TTGAGCAAAC TTTGACGCGA AACGGAACTT CGCGGACTGC GAGTAATAAT CCGGTGAATT TTGGCTCGGG CCGTGGTTGG TATGTCGACC TGAAGGATAC AAGTCTGTCC CCATCGAATG TTGGTGAGCG AGTAAACATT GATATGACCT TGGTTCAAGG GACTTTGATT GCTGCAAGCA TAGTTCCGTC CAACACCGTA TGTTCGCCTG GTGGCTATGG CTGGCTTAAC TACTTTAATT ACGAGACTGG TGGATATGTG CAGTCGGATG CCCTAGCGTC GACTTACTTC AGTTCCCCGA TTGTCGGTGT CAACCTGATA TACATTCAGG GCAAGCCGAT TGTTGAGGTG GTTACGGCTA ACAAGCCAAC GCCCGAAATT ACGGAAGTGC CAATCACCGG TAAGGGTAGT AACTTTGCCG GTAAGCGGGT TATGTGGCGC GAGCTGGTTC AGTAG
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Protein sequence | MKASAHHNSV IRQALSLLIV FQLGFSSPSH AASIALASAP LANSTTTTVL PNLMFLMDNS GSMSQDFTPD YMMEYNWRNS PWTSNGWNAP DPVQKNCRDS ADDDGSVTTA LADLDLCVVG DVPYMTSSIN SQYYNPAIRY LPGVLSDGVS KPSQTDPTNV LLDGYGKHNQ TQLGVAGTAI DLTTNYPDRV WCTKNNPTAA ELADTSVCRK NSDYLYPNAT YKYGRNNDGT TANKDVLGVM GAPYYYQVVV SEYCKEAELR NCTTSSVATG DYIFPAKSRW CSDTALTTCQ STKTSTYKYP RYVGASTVAV AASGIIQATN TTPRTISSIT VNGVEILGAL VTGTSQIDLA SKVATQINAY ASNPEYSAAL YGDNTYVKIT STAAAGASAN GTVVITGRGI VTSNVSGGVT GFSAAPYSFA RTDIVPATTS YPKATSRTDC TGATCTYADE VTNFANWYAY YRTRMQSMKS SVSLAFRPIG SNYRVGFMNI CKGSYLPVAP FDNSDSLIGA VAASGTFRFN SFTAGVMQTV TSIKVNGIEI LGATVTSNVS RADLATKLAA QINAFLSSPE YTAVANSGGS NGLVTLSGSI GDGAGSNGTI VVTGGPSLST NAGVSGGVTG SGQKSKWYET LFDQTAVGCG TPLRSALATT GRIFAGKEMS SAGSTSGSTI DPVQYSCQQN FTLLTTDGYW NGAGGTDLDG VAMGNLDGGT TPRPMFEGNT ATGTLADVAK YYYDTDLRTS GLSNCTGSLG IDVCENNVFV SSTDNNLKQH MTTFTLGLGV DGTLSYVSDY KNATTGDFYN LKEGLGSPVV NWPVPVADNE TAVDDLWHAA VNGQGTYFSA KDPAQLAYGL STALNQIGSK VGATSAAATS TLNPVAGNNF AYVASYSSVK WTGNLEARTI NTTTGVVSET AAWCVQSISA GTCALPSTIV TEDTGSSTVT YCVTSGATAA SCTDGILDGT NCKVQLPTSC VGTMNSKVDK SSDSRTIYKA NASGALESFI YANLDSSLFT GTGLSQWSVL TASQKTVAAG ENLVNFLRGQ TGYEDRTSNP VDNRLYRMRE ATMGDALESQ PFFISKPVFS YADAGYAKYK TDFASRAGSV YMGTNDGMLH AFAADTGVER WAYVPTVVIP NLWKLADKNY ATGHANYVNG SPVISDICTA NCSCDDACVS GGGTAPVWKT ILVGGLNAGG RSFYALDITN PASPSLLWEV SSSTAGFTNL GYSFGHPIIT KKSDGTWVVL ITSGYNNTSP GDGKGYLYVL NAGTGALIAA IGTTVGDTTT PSGLARVSAW NDYGGVNNTA GYVYGGDLLG NLWRFDINAE SVNKFATLLD SSGKAQPVMT SPTLGLISGK RVVFVGTGKY LEVSDLTNTD SQTIYAISDD NSGTTLVNAR TVLVEQTLTR NGTSRTASNN PVNFGSGRGW YVDLKDTSLS PSNVGERVNI DMTLVQGTLI AASIVPSNTV CSPGGYGWLN YFNYETGGYV QSDALASTYF SSPIVGVNLI YIQGKPIVEV VTANKPTPEI TEVPITGKGS NFAGKRVMWR ELVQ
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