Gene Daro_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3023 
Symbol 
ID3568691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3269222 
End bp3270145 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID637681494 
ProductCobD/CbiB family protein 
Protein accessionYP_286223 
Protein GI71908636 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value0.473012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.958188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTC TCTCGCTGAT TGCAGTTTTT CTCATCGAGC AGCTGCAACC CCTTGATTAC 
CGGCGTGTTG TTGCTGATCC GCTTGGCGCA TGGGCGGATT TTATCGAATC CCGCTTCAAC
GCCGGTGCCT ACAGGCATGG CGTACTTGCC TGGTGCTTGG CGGTGTTGTT GCCTGTGCTG
GTCGTGGCGA TTGCCTACGG CTTGCTTTAC TCGCTGAACC CGGTCTTCGG CCTGCTGCTC
AATATCGGCG TGCTGTACCT GACCATGGGC TTCCGGCAGT TCAGTCATCA CTACACCGAA
ATCCAGTTGG CCTTGCGCCT GGGTGACTTG GAGCGAGCCC GGCAATTGCT TGGCGAATGG
CAGGGGCGCT CAACCTATAA CCTTGGCTCT GAAGATATTG CCCGGCTTTC CATCGAAGGG
GCGCTGGGGG CTTCACATCG CCACGTATTT GCCGTCTTGC TGTGGTTTAT CCTGTTGCCC
GGACCTTGCG GTGCCTTGCT CTACCGCCTT TCACTGATTG TCCGTGATCG CTGGAATAGC
GAAAATGCCG GCCAGAGCAA TGATTTTTTC ATTTTTTCCA AACAAGTTTT CGGTATGATC
GACTGGCTGC CTTTGCGAGC GACCGCTTCG GCTTTCGCCA TCGTTGGCGA TTTCGAGGAC
GCTGCCTATT GCTGGCGTAC CCAGCCGGCA CAGTGGCCGG ACCGCGACAT GGGTATTGTG
CTGGCGGCCG GTGCTGGTGC CCTCGGCGTC CAGTTGGGAC GGCCGGTGGC GGATGGCGTG
GAAGTATCCG ATCGTGCCGA GTTGGGTCTG GGTGACCCGG CCGACGTAGA TTTTATGCAG
AGCGCCGTCG GACTCGTCTG GCGAGCCACG GTGTTGTGGA TGTTGTTGCT GTTTTTGTTG
GGGCTTGCCA GTTTGGTGGG CTGA
 
Protein sequence
MSLLSLIAVF LIEQLQPLDY RRVVADPLGA WADFIESRFN AGAYRHGVLA WCLAVLLPVL 
VVAIAYGLLY SLNPVFGLLL NIGVLYLTMG FRQFSHHYTE IQLALRLGDL ERARQLLGEW
QGRSTYNLGS EDIARLSIEG ALGASHRHVF AVLLWFILLP GPCGALLYRL SLIVRDRWNS
ENAGQSNDFF IFSKQVFGMI DWLPLRATAS AFAIVGDFED AAYCWRTQPA QWPDRDMGIV
LAAGAGALGV QLGRPVADGV EVSDRAELGL GDPADVDFMQ SAVGLVWRAT VLWMLLLFLL
GLASLVG