Gene Daro_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3022 
Symbol 
ID3568690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3268014 
End bp3269195 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content61% 
IMG OID637681493 
Productbeta-ketothiolase 
Protein accessionYP_286222 
Protein GI71908635 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.00935658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.736627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAG ATGTCGTCGT TCTGAGCGCA GTTCGTTCCG CTATTGGTGC TTTTGGTGGT 
GCCCTGGCCG ATTTCGAATC TACCGAGCTG GCTGGTATCG TCATGAAGGA AGCGATTGCC
CGTTCCGGTG TCGATCCCCA AGCAATCAAC TACGTAACCG TCGGCACCAC GATGCCGACC
GATTCCCGCT ACGCCTATGT TTCCCGCGTT GCTTCCATCC AGGCCGGCTT GTCGATGGAT
TCCGTCGCCA TGCAGGTTTC CCGCCTGTGC GCTTCCGGTC TGCAAGGTAT CGTGACGACC
GCCCAGAACC TGATGCTGGG TGATGCCGAC TACGGTATCG GCGGCGGCGT TGAAGTCATG
TCCAAGGCTG CCTACTTGCT GCCGGCACTG CGCAACGGTG CTCGCATGGG TGACACCAAG
GCCATCGACT CGATGGTTGC CGTGCTGACC GATCCGTTTG GCGTTGGTCA CATGGGTATT
ACTGCTGAAA ACCTCGCTGC CAAGCATGGC TTCAGCCGTG AAGACCAGGA TGCCTTCGCT
GTCGAATCGC AGCGTCGCGC TGCTGCCGCC ATTGATGCCG GCTACTTCAA GTCGCAGATC
GTGCCGATCG TCAAGCAGAC CCGCAAGGGC GACGTGGTGT TCGACACCGA CGAGCACCTG
AAGCGTGGCA CGACCATGGA ATCCCTGGCC AAGATGAAGC CGGCCTTCAA GAAGGACGGT
ACCGTTACCG CCGGTAACGC TTCCGGCATC AACGACGGCG CTGCTTTCTT CGTGCTGGCT
GCCGCTGATG TGGCTGCCAA GGCTGGTCAC AAGGCTCGTG CCCGTATCGC TGGCTATGCC
GTTGCCGGCG TGCCGAACGA TGTCATGGGC GAAGGCCCGA TCCCGGCGAC CAAGGCTGCC
CTGAAGAAGG CTGGCCTGAC CCTGGATCAA ATGGATGTCA TCGAGTCCAA CGAAGCCTTC
GCTGCCCAGG CACTGTCGGT TTCCAAGGTG CTCGGCCTTG ATCCGGCCAA GACCAACCCG
AACGGCGGCG CGATCGCCCT CGGTCACCCG GTTGGCTGTT CCGGTGCCTT CATCGCCACC
AAGGCGCTGT ATGAACTGGA ACGCATTGGC GGCAAGTACG CACTGGTCAC CATGTGTATC
GGTGGCGGCC AAGGTATTGC GGTCATCTTC GAACGCGCCT AA
 
Protein sequence
MSRDVVVLSA VRSAIGAFGG ALADFESTEL AGIVMKEAIA RSGVDPQAIN YVTVGTTMPT 
DSRYAYVSRV ASIQAGLSMD SVAMQVSRLC ASGLQGIVTT AQNLMLGDAD YGIGGGVEVM
SKAAYLLPAL RNGARMGDTK AIDSMVAVLT DPFGVGHMGI TAENLAAKHG FSREDQDAFA
VESQRRAAAA IDAGYFKSQI VPIVKQTRKG DVVFDTDEHL KRGTTMESLA KMKPAFKKDG
TVTAGNASGI NDGAAFFVLA AADVAAKAGH KARARIAGYA VAGVPNDVMG EGPIPATKAA
LKKAGLTLDQ MDVIESNEAF AAQALSVSKV LGLDPAKTNP NGGAIALGHP VGCSGAFIAT
KALYELERIG GKYALVTMCI GGGQGIAVIF ERA