Gene Daro_3018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3018 
Symbol 
ID3568686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3263231 
End bp3264445 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID637681489 
Producthypothetical protein 
Protein accessionYP_286218 
Protein GI71908631 
COG category[R] General function prediction only 
COG ID[COG2081] Predicted flavoproteins 
TIGRFAM ID[TIGR00275] flavoprotein, HI0933 family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.0943538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.733965 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTTG ACGTGATCAT CATCGGCGCC GGCGCGGCCG GCATGATGTG CGCCGCACAG 
GCCGCGGCCC GTGGCCGACG GGTGCTGCTG CTTGATCATG CCGAAAAACT GGGCGAGCGC
ATCCGTATAT CGGGTGGTGG GCGCTGTAAC TTCACCAATC GCACAGTCAG CGCTGACAAC
TATCTTTCGC ATAACCCCCA TTTTTGCCGC TCGGCACTTG CCCGTTTTTC TCAGCTCGAC
TTTATTGCGA TGATCGAGAA GCGGCGTATT CCTTATCATG AGCGCGAACA TGGCCAGTTG
TTCTGCGACG AATCGGCCGA AGAGATCATC GATATGCTGC GCGATGCCTG CGACGATGGC
GGGGTGAAAT GGGCCTTTCC ATGTGCGGTC AAGCATATCG AACGGAACGA GGGCGAGGCG
GTGAAGCGCT ATGCCGTTGC TACCGATAAC GGCAGCTTCT CCTGTCAATC TCTGGTGGTC
GCTACTGGCG GTCTGGCCAT TCCGAAAATC GGGGCCAGTC CGTTTGGCTA CCGCCTGGCC
GAACAATTCG CCGTTCCGGT CATTCCGCCC AAACCCGCCC TCGTGCCATT GGCCTTGGCG
CCGGAACTGC TTGAGCCGAT GAAACCCCTG GCGGGTGCGA CGCTCGATGC CGTTGCCCAG
TTCGAAGACG CCCAATTCCG CGAGAACGTG CTGATTACTC ATCGCGGCCT GTCCGGCCCG
GCCATCCTGC AGATTTCCAG CTACTGGCAG ATGCAGGAGT ACAGAAGTGG CAAGAAACAA
CCGGTCGAGA TCGACCTGTT GCCTGGTCTC GATACAGGTG CCTGGCTGGA AGAGCACCGG
CAGGGCCGGG TGCATCTACC TAACCTGCTG GCAGAAAGGC TTCCTCGGCG TTTTGCCCAT
GAATGGTGTG CGCTGCAGGG CGGCGAAAAA CTGGTGACTC GTCCAATCAG TGAACTGAGC
CGGCGTGATC TGGAAACGGT CGCCACCCGA CTCAATGCCT GGCCACTGAT GCCGGCGGGT
ACGCTCGGAT TTGCCAAGGC GGAAGTCACA CTGGGCGGCG TGTCGACCGA TGCGCTGTCA
TCGAAGACAA TGGAGGCCAA GGCGGTGCCG GGCTTGTTCT TCGTGGGCGA GGTGGTCGAT
GTGACCGGTT GGCTGGGCGG CTACAACTTC CAGTGGGCCT GGTCGTCGGG CTGGGTGGCC
GGGCAGTTCG CCTGA
 
Protein sequence
MHFDVIIIGA GAAGMMCAAQ AAARGRRVLL LDHAEKLGER IRISGGGRCN FTNRTVSADN 
YLSHNPHFCR SALARFSQLD FIAMIEKRRI PYHEREHGQL FCDESAEEII DMLRDACDDG
GVKWAFPCAV KHIERNEGEA VKRYAVATDN GSFSCQSLVV ATGGLAIPKI GASPFGYRLA
EQFAVPVIPP KPALVPLALA PELLEPMKPL AGATLDAVAQ FEDAQFRENV LITHRGLSGP
AILQISSYWQ MQEYRSGKKQ PVEIDLLPGL DTGAWLEEHR QGRVHLPNLL AERLPRRFAH
EWCALQGGEK LVTRPISELS RRDLETVATR LNAWPLMPAG TLGFAKAEVT LGGVSTDALS
SKTMEAKAVP GLFFVGEVVD VTGWLGGYNF QWAWSSGWVA GQFA