| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3002 |
|---|
| Symbol | |
|---|
| ID | 3567315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 3240357 |
|---|
| End bp | 3241607 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637681473 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_286202 |
|---|
| Protein GI | 71908615 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 52 |
|---|
| Plasmid unclonability p-value | 0.891499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAAA CCTTCAAGCT TTTCTTTCTC GCCTTCTTTG CGCTAACGCT CGCCACTCGC
CTGTGGCTGA AGCTGCGGCA CATCCGCTTC GTTACCGCCC ACCGCGAAAA ACTGCCGGCG
GATTTCGCCG AACGGGTGAC GCTGGCGGCC CACCAAAAGG CGGCCGATTA CACCGTGGAC
CGCAGCAAGG TAGCGGTTAT CAGTACACTT ATTGAAGCCA CACTGCTGCT GGCACTGACC
CTCGGCGGCG GGCTGACCAG CCTTCACGAA TTCTGGATTC TCCGAACCGA TGGCCTGGGC
TATGGCCTGG CGATGATTTT CAGCCTGATG TTCATTTCCG GACTGATCGA CCTGCCGCTG
TCGCTCTACA GCCAGTTCGT CATCGAGGCC CGCCATGGTT TCAACCGCAT GACGCTCGGC
CTGTTCATTG CCGATCTGAT CAAACAGACG CTGCTCGGCA TCGCGATCGG CACCCCGGTG
ATCCTCGCCG TGCTCTGGCT GATGGGCGCG ATGGGGCAAT ACTGGTGGCT TTATGTCTGG
CTGTTCTGGA GCAGCTTCAA TCTGCTGATC ATGTTCGTTT ATCCGACCTG GATCGCCCCG
CTGTTCAACA AGTTTTCGCC CCTTGAGGAT GGCGAAATGA AAGCCCGCAT CGAAGCCCTG
CTGGTCCGCT GCGGCTTCCG CTCCTCCGGC CTCTTCGTCA TGGATGGCTC GAAGCGCTCC
AGTCATGGCA ACGCCTACTT CACCGGCTTC GGCAACAACA AACGGATCGT TTTCTTCGAC
ACCCTGCTAT CCCGTCTCGA ACCGCCAGAA ATCGAAGCCG TACTGGCCCA CGAACTCGGC
CACTTCCGCA AGAAACATGT AGTCAAGCGC ATGGTCATCA TGTTCGCCGG ATCGCTCGGC
TTTCTCTGGC TGCTCGGCCA ACTGATCGAT GCGCCGTGGT TTTATGCCGG CCTTGGCGTG
ACAGCACAAA ATACCGCCCT GGCACTGATC CTCTTTTTCC TCGTCATGCC GGTACTCACC
TTTCCATTTA CCCCGCTGAT GAGTCATTTT TCCCGCCAGC ACGAATTCGA GGCGGATGCC
TATGCGGCCG AACACGCCGA GGGCGGCGAT CTCGTCTGCG CCCTGACCAA GCTCTACCAG
GACAATGCTT CAACGCTGAC GCCCGACCCG CTACACTCGC TGTTCTATGA CTCCCACCCG
CCAGCTGCCC AGCGCATCGC GCATCTGCAA CTTCAGGAAA AAACCGCATG A
|
|---|
| Protein sequence | MTETFKLFFL AFFALTLATR LWLKLRHIRF VTAHREKLPA DFAERVTLAA HQKAADYTVD
RSKVAVISTL IEATLLLALT LGGGLTSLHE FWILRTDGLG YGLAMIFSLM FISGLIDLPL
SLYSQFVIEA RHGFNRMTLG LFIADLIKQT LLGIAIGTPV ILAVLWLMGA MGQYWWLYVW
LFWSSFNLLI MFVYPTWIAP LFNKFSPLED GEMKARIEAL LVRCGFRSSG LFVMDGSKRS
SHGNAYFTGF GNNKRIVFFD TLLSRLEPPE IEAVLAHELG HFRKKHVVKR MVIMFAGSLG
FLWLLGQLID APWFYAGLGV TAQNTALALI LFFLVMPVLT FPFTPLMSHF SRQHEFEADA
YAAEHAEGGD LVCALTKLYQ DNASTLTPDP LHSLFYDSHP PAAQRIAHLQ LQEKTA
|
|---|
| |