Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_3000 |
Symbol | |
ID | 3567313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3238074 |
End bp | 3239696 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637681471 |
Product | hypothetical protein |
Protein accession | YP_286200 |
Protein GI | 71908613 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.0521457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAT TAAGCACCCT GCTCCGTCGC GGTATCCGCT TGCCTCCGGC CGGCTGGATG CTTGCCGCCA TGCTCGCCTT CTACGTGCTG GCCGGCCTGT TCGGCCGCGA TCCGTGGAAG GGCGAAGACG CCATTCACAT CGGTGCAGCA TGGCACATGC TGCACTTCAG CGACTGGCTG TCTCCCGACC TGGCCGGCCG GCCATTCCAC GAACCGCCGT TGTACTACTG GAGTGCCGCG CTGACCGGCA AGGCATTCGG CTGGCTGCTC CCTCTCCACG AGGCCATGCG TCTCGCCAGC GGCATCTGGG TCACCTTGGC CTTGATGGGC CTGTACTACG CCAGCCGCGA GCTGTACGGC GAGGACTCTG CAGCCGCGAG CCCGATGTTG CTGGCAGGTT GCGCCGGCCT GCTCTTCCAT GCCCACGATG CGCAGCCGAT GCTGATTGCG CTTGCCGCCT ATAGTGGCGC TCTGGGTGGC TTGGCCGCGA TTGGGCGCAA GCCACGACTG ACCGGCATCT ACTACGGACT GGCCGTTGCC GGTTGCCTGC TCGGCACCGG CATTGCCCCA ACCCTGCCGT TACTTGCCAT CGCCCCGGTC GCCTGGTGGT TATCCCCTGA CCGCCCCAAG GCCTTGCACA CACTGCTCAT CGGTTTTGGC ATCGCGACGG TGCTGATTCT GCCATGGCCA CTGTTACTGC TGACCCTTGA ACCAGCACGT TTTCATGGCT GGCTAGCCAC TGAACTGGCG CCGCTGAAGA CCCCGTTCTC CTTCGGCGGC GGCAGCCGTT TCCTGGCCAT GTTGCCCTGG TTTGCCTTCC CCGCCATGCC GCTGGCGGCC TGGACCTTAT GGACCAGACG CAAGGAACTG CAGACCCCGT CGTTCTTGTT GCCGCTCTCC TTCCTGCTGA TCACCCTGCT GATGCTGGCC TGGGCGTTCC GCCCCCGGGA AATCCCATCC CTGTTGCTCT TGCCGTCACT AGCCCTGCTC GCCACGCCTG GCACGCTGGC CCTGCGTCGC GGTGCAGCCA ATGCCTTCGA CTGGTTTGCA ATGTCGACCT TCAGCCTGTT CGTCGCCGTC GTCTGGCTGG CCTGGTCGGC AATGGCCCTT GGCTGGCCAT CAAAACTCGC CGAGCGGGCA CTGATCCTGC GCCCCGGTTT TGTCGGCCAC TTCAGTCTGG TCGCACTGCT CATCGGCCTT GCAGCCACGG CGTGGTGGAT CTGGCTGATC ATCACTGCCC CACGCTCACC GTATCGCAGC CTGACGCACT GGACACTCGG CTTCACAACC TTGTGGCTAC TGGCAACAAC GCTGATCCTG CCATGGTTCG ACTACGGCAA GACCTACCGG CCGGTCGCCC AGGCGATCGC CCAGGCCCTG CCAGCCGATC ACGGCTGCCT GGCCGAACGC GGCTTGAGCG AAACCCAGCT GGCGTCGATG TCCTATTTCG TCGAAATCGA GCCGGTTGCC GAAGACTCCA AGGCGGGCCA AGCTTGCAAC TGGCTGCTGG TAGTCGGCGA CACGCGCCGT GAGTTGGCAG CACCGGGCAA GCAGTGGTCC AAGGTCTGGG AAGGCAGCCG CCCCGGGGAC CGCAAGGAAA AATTCCGTCT TTTCCGGCGC TAA
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Protein sequence | MSELSTLLRR GIRLPPAGWM LAAMLAFYVL AGLFGRDPWK GEDAIHIGAA WHMLHFSDWL SPDLAGRPFH EPPLYYWSAA LTGKAFGWLL PLHEAMRLAS GIWVTLALMG LYYASRELYG EDSAAASPML LAGCAGLLFH AHDAQPMLIA LAAYSGALGG LAAIGRKPRL TGIYYGLAVA GCLLGTGIAP TLPLLAIAPV AWWLSPDRPK ALHTLLIGFG IATVLILPWP LLLLTLEPAR FHGWLATELA PLKTPFSFGG GSRFLAMLPW FAFPAMPLAA WTLWTRRKEL QTPSFLLPLS FLLITLLMLA WAFRPREIPS LLLLPSLALL ATPGTLALRR GAANAFDWFA MSTFSLFVAV VWLAWSAMAL GWPSKLAERA LILRPGFVGH FSLVALLIGL AATAWWIWLI ITAPRSPYRS LTHWTLGFTT LWLLATTLIL PWFDYGKTYR PVAQAIAQAL PADHGCLAER GLSETQLASM SYFVEIEPVA EDSKAGQACN WLLVVGDTRR ELAAPGKQWS KVWEGSRPGD RKEKFRLFRR
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