| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2995 |
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| Symbol | |
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| ID | 3567308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 3233258 |
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| End bp | 3235246 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637681466 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_286195 |
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| Protein GI | 71908608 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 47 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG CCCCTCCACC CCTTCCCGGT AGTTCGCGCC GCCTGCGCTG GCTGCTCACC
CTGCCCAAGC TGGGCATCGT GCTGCTGCTG GCCGCCCTGC TCGCTCTCCT CTGGCAACTC
CACCGTAGCG AGATAGAGGA AGATCGCGCG GCGCTGATCA AGGATGTTCT GTGGCTCGAA
CAGAACCTGC GCTTCCATCT GAACAGCAAC GAAGAGCAAG TCCAGCAATT GGCGCTGGAA
ATGGCCAACC CGGCCGGCCG TCAAAAAAAA TTCCGACTCC GGGCCGAGCA CATGCTCAAG
AACGCACCGG AAATCGCCCA GATTCTTTGG CTCGACAACC ACCGTCAGGT CATCGATGCG
CTACCGACGA GCACCCCGCC CGACAGCGAA ATCGAGTCAT TCGGGCCACC GGTCACGGCC
AAGGCCTTTG ACACAGCGAC CCGATTGGGC AAGCTGCATT ACAGCGAACC CTTTTTCCTG
GAAGGCAATC AGGCCTTCGT TGAAATGCTC GTCCCGGTAT TTGGCGAAGA ACACCGCATC
AGCGGCATGC TGGCCGTGCT TTACCCACTA GACGCACTAC TCGACAATCA GGTTCCCTGG
TGGTTTACCG AAAAATACAA GGTCGAGATT GTTGACGATA ACGACCTGCA ATACGCCACC
AAAACACGTA TCGAAGGAAA TAGCGACCAG CGCTACGAAA TCCCATTCGA CCCACCCGGC
GCCGGCTTGC TACTCCGCAT TACCAGCTAC CACACGCCCG ACAACTCGAT GCAGCGCCTG
CTGGTTGCCG CCATCATCCT GCTCGCCATC GGGGTTTTCT GGAGCCTGTG GCTGGTCCGC
GACCTGATGA AAAGGCACAG CCGGACCGAA GAGGCGCTAC GGGCAGAACA CGCCTTCCGC
GCAGCGATGG AAGACTCGCT GACCGTCGGC ATGCGCGCTC GCGACCTCGT CGGCCGGGTC
ATCTACGTCA ACCCGGCATT CTGCCGGATG ACCGGCTTCA GCCCCGACGA GCTGGTCGGC
GCAGCGCCAC CAATGCCTTA CTGGGCCCCC GAGCAACTGG AAGAAACCTA TGCCATGCAC
CAGACCGTGC TGGCCGGAGA AGCGCCTTTA GACGGCTTCG AAATCACCTT CATGCGCAAA
AACGGCGAAC GTTTCCAAGC CCTGGTCTAT GAAGCCAAAC TGATTGACGG AAACGGCAAA
CACACTGGCT GGATGGCCTC GGTACTCGAC ATTACCGAAA GGAAGCGCGC CGAAGAACTG
GCCCGCCAGC AGCAGGAACA GTTGCAATTT ACTTCGCGGC TGGTAACGAT GGGGGAAATG
GCCTCTACCT TGGCCCACGA GCTGAATCAG CCACTCGCAG CGATCGCCAG CTACAACACG
GGTTGCCTGA ATTTATTGAA CGACGGCAAA GCCAGTCCGA ACGATATTTT GCCCGCGCTA
GAAAAAATTG GCCTGCAGGC ACAACGGGCC GGCAAGATCA TCCGCCGCGT CCACGACTTT
GTCCGCAAGA GCGAGCCCAA GCGCGCCTCT TGCCTGCTTG GCGAAGTGAT CGAAGACTGC
CTGGGCTTCA TGGAGGCCGA AGCCCGCAAG CGCCATGTCC GGATCGAATG CAACACCCCG
CCCATGCCGC CGGTCCTGGC CGACCGGCTA ATGCTCGAAC AGGTACTCCT CAACCTGATT
CGCAACGGCA TGGAAGCAAT GGCCACGACC AGCGAAGTCA ACCGCCTGTT GCATATCTCC
ATCGAAGTCA GTGAAAACGA ATTGCGTATA AGCGTCAGCG ACCAAGGTTG TGGCATCGCC
CCGGAAGTCC GTGCCAAGCT GTTTACTGCC TTCTTCACCA CAAAACCAGA AGGCATGGGC
ATCGGCTTGT CGATCTGTCG TTCAATCATT GAATTCCATC GCGGCCGCCT GTGGGCCGAA
GAGAACCCCC ATTCAACGAC AGGAAACGGT ACGATATTCT TCTTTACTCT CCCCCTGGAA
AGCGCATGA
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| Protein sequence | MNQAPPPLPG SSRRLRWLLT LPKLGIVLLL AALLALLWQL HRSEIEEDRA ALIKDVLWLE
QNLRFHLNSN EEQVQQLALE MANPAGRQKK FRLRAEHMLK NAPEIAQILW LDNHRQVIDA
LPTSTPPDSE IESFGPPVTA KAFDTATRLG KLHYSEPFFL EGNQAFVEML VPVFGEEHRI
SGMLAVLYPL DALLDNQVPW WFTEKYKVEI VDDNDLQYAT KTRIEGNSDQ RYEIPFDPPG
AGLLLRITSY HTPDNSMQRL LVAAIILLAI GVFWSLWLVR DLMKRHSRTE EALRAEHAFR
AAMEDSLTVG MRARDLVGRV IYVNPAFCRM TGFSPDELVG AAPPMPYWAP EQLEETYAMH
QTVLAGEAPL DGFEITFMRK NGERFQALVY EAKLIDGNGK HTGWMASVLD ITERKRAEEL
ARQQQEQLQF TSRLVTMGEM ASTLAHELNQ PLAAIASYNT GCLNLLNDGK ASPNDILPAL
EKIGLQAQRA GKIIRRVHDF VRKSEPKRAS CLLGEVIEDC LGFMEAEARK RHVRIECNTP
PMPPVLADRL MLEQVLLNLI RNGMEAMATT SEVNRLLHIS IEVSENELRI SVSDQGCGIA
PEVRAKLFTA FFTTKPEGMG IGLSICRSII EFHRGRLWAE ENPHSTTGNG TIFFFTLPLE
SA
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