Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2995 |
Symbol | |
ID | 3567308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 3233258 |
End bp | 3235246 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637681466 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_286195 |
Protein GI | 71908608 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAG CCCCTCCACC CCTTCCCGGT AGTTCGCGCC GCCTGCGCTG GCTGCTCACC CTGCCCAAGC TGGGCATCGT GCTGCTGCTG GCCGCCCTGC TCGCTCTCCT CTGGCAACTC CACCGTAGCG AGATAGAGGA AGATCGCGCG GCGCTGATCA AGGATGTTCT GTGGCTCGAA CAGAACCTGC GCTTCCATCT GAACAGCAAC GAAGAGCAAG TCCAGCAATT GGCGCTGGAA ATGGCCAACC CGGCCGGCCG TCAAAAAAAA TTCCGACTCC GGGCCGAGCA CATGCTCAAG AACGCACCGG AAATCGCCCA GATTCTTTGG CTCGACAACC ACCGTCAGGT CATCGATGCG CTACCGACGA GCACCCCGCC CGACAGCGAA ATCGAGTCAT TCGGGCCACC GGTCACGGCC AAGGCCTTTG ACACAGCGAC CCGATTGGGC AAGCTGCATT ACAGCGAACC CTTTTTCCTG GAAGGCAATC AGGCCTTCGT TGAAATGCTC GTCCCGGTAT TTGGCGAAGA ACACCGCATC AGCGGCATGC TGGCCGTGCT TTACCCACTA GACGCACTAC TCGACAATCA GGTTCCCTGG TGGTTTACCG AAAAATACAA GGTCGAGATT GTTGACGATA ACGACCTGCA ATACGCCACC AAAACACGTA TCGAAGGAAA TAGCGACCAG CGCTACGAAA TCCCATTCGA CCCACCCGGC GCCGGCTTGC TACTCCGCAT TACCAGCTAC CACACGCCCG ACAACTCGAT GCAGCGCCTG CTGGTTGCCG CCATCATCCT GCTCGCCATC GGGGTTTTCT GGAGCCTGTG GCTGGTCCGC GACCTGATGA AAAGGCACAG CCGGACCGAA GAGGCGCTAC GGGCAGAACA CGCCTTCCGC GCAGCGATGG AAGACTCGCT GACCGTCGGC ATGCGCGCTC GCGACCTCGT CGGCCGGGTC ATCTACGTCA ACCCGGCATT CTGCCGGATG ACCGGCTTCA GCCCCGACGA GCTGGTCGGC GCAGCGCCAC CAATGCCTTA CTGGGCCCCC GAGCAACTGG AAGAAACCTA TGCCATGCAC CAGACCGTGC TGGCCGGAGA AGCGCCTTTA GACGGCTTCG AAATCACCTT CATGCGCAAA AACGGCGAAC GTTTCCAAGC CCTGGTCTAT GAAGCCAAAC TGATTGACGG AAACGGCAAA CACACTGGCT GGATGGCCTC GGTACTCGAC ATTACCGAAA GGAAGCGCGC CGAAGAACTG GCCCGCCAGC AGCAGGAACA GTTGCAATTT ACTTCGCGGC TGGTAACGAT GGGGGAAATG GCCTCTACCT TGGCCCACGA GCTGAATCAG CCACTCGCAG CGATCGCCAG CTACAACACG GGTTGCCTGA ATTTATTGAA CGACGGCAAA GCCAGTCCGA ACGATATTTT GCCCGCGCTA GAAAAAATTG GCCTGCAGGC ACAACGGGCC GGCAAGATCA TCCGCCGCGT CCACGACTTT GTCCGCAAGA GCGAGCCCAA GCGCGCCTCT TGCCTGCTTG GCGAAGTGAT CGAAGACTGC CTGGGCTTCA TGGAGGCCGA AGCCCGCAAG CGCCATGTCC GGATCGAATG CAACACCCCG CCCATGCCGC CGGTCCTGGC CGACCGGCTA ATGCTCGAAC AGGTACTCCT CAACCTGATT CGCAACGGCA TGGAAGCAAT GGCCACGACC AGCGAAGTCA ACCGCCTGTT GCATATCTCC ATCGAAGTCA GTGAAAACGA ATTGCGTATA AGCGTCAGCG ACCAAGGTTG TGGCATCGCC CCGGAAGTCC GTGCCAAGCT GTTTACTGCC TTCTTCACCA CAAAACCAGA AGGCATGGGC ATCGGCTTGT CGATCTGTCG TTCAATCATT GAATTCCATC GCGGCCGCCT GTGGGCCGAA GAGAACCCCC ATTCAACGAC AGGAAACGGT ACGATATTCT TCTTTACTCT CCCCCTGGAA AGCGCATGA
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Protein sequence | MNQAPPPLPG SSRRLRWLLT LPKLGIVLLL AALLALLWQL HRSEIEEDRA ALIKDVLWLE QNLRFHLNSN EEQVQQLALE MANPAGRQKK FRLRAEHMLK NAPEIAQILW LDNHRQVIDA LPTSTPPDSE IESFGPPVTA KAFDTATRLG KLHYSEPFFL EGNQAFVEML VPVFGEEHRI SGMLAVLYPL DALLDNQVPW WFTEKYKVEI VDDNDLQYAT KTRIEGNSDQ RYEIPFDPPG AGLLLRITSY HTPDNSMQRL LVAAIILLAI GVFWSLWLVR DLMKRHSRTE EALRAEHAFR AAMEDSLTVG MRARDLVGRV IYVNPAFCRM TGFSPDELVG AAPPMPYWAP EQLEETYAMH QTVLAGEAPL DGFEITFMRK NGERFQALVY EAKLIDGNGK HTGWMASVLD ITERKRAEEL ARQQQEQLQF TSRLVTMGEM ASTLAHELNQ PLAAIASYNT GCLNLLNDGK ASPNDILPAL EKIGLQAQRA GKIIRRVHDF VRKSEPKRAS CLLGEVIEDC LGFMEAEARK RHVRIECNTP PMPPVLADRL MLEQVLLNLI RNGMEAMATT SEVNRLLHIS IEVSENELRI SVSDQGCGIA PEVRAKLFTA FFTTKPEGMG IGLSICRSII EFHRGRLWAE ENPHSTTGNG TIFFFTLPLE SA
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