| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2993 |
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| Symbol | |
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| ID | 3567306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 3230595 |
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| End bp | 3231599 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637681464 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_286193 |
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| Protein GI | 71908606 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 0.00571621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTT CAAAGCTGTT GATTGGCCTG TTTGCTGGTG CACTGTCGCT GGCTGTTTAT
GCTCAGCAAC CCATTGTCAT AAAGTTCAGC CATGTTGTGG CTGCTGATAC ACCCAAGGGA
AAAGCTGCGG AAATGTTTGC CAAAAAGGCT GCCGAACTGA CTGGCGGCAA GGTCAAGGTC
GAGGTGTACG CTAATTCGAC GCTGTACAAG GACAAGGAGG AAATGGAGGC GCTGCAGCTC
GGCGCTGTCC AGATGCTGGC ACCGTCGCTG GCCAAGTTTG GTCCGCTGGG CGTCAAGGAG
TTTGAGGTCT TTGATCTGCC GTTTATCTTC AGCGACTATG ACGCTTTGCG TAAAGTCACC
AATGGCGCTG TTGGTAGGCA ACTATTGGCC AAGCTGGAGC CCAAGGGAAT CCGCGGCCTG
GGCTACTGGG ACAACGGCTT CAAATCCTTT TCGGCCAATA CCCCGATCAG AACGCCGGCT
GACCTGAAGG GCAAGAAAAT GCGCATCCAG TCGTCCAAGG TGCTCGAGGA GCAGATGCGT
TCGCTTGGCT CAATGCCCCA GGTGATGGCC TTTTCCGAGG TTTACCAGGC GCTGCAGACC
GGCGTGGTTG ACGGGACAGA GAATCCGATT TCGAATCTCT ATACTCAGAA GATGCACGAA
GTGCAAAAGT ATCTGACGCT GACCGAGCAT GGCTATCTGG GCTACGCAGT GATCGTTAAC
AAGAAGTTTT GGGACGGTCT GCCAACGGAT ATTCGCAAAC AGCTTGAAGA TGCGATGGAG
CAGGCAACCC GCTACGCCAA CCAGATTGCC AAGGTCGAGA ACGATAACGC CCTTGAGGCT
GTGAAGAAGA GTGGCAAGAC GACTGTTTAT GTACCGACCA AGGAAGAGCG TCTGGCTTTC
AAGAAAGCAC TGGTACCGGT GCATCAGAAG ATGGAAGGGC GTATCGGCAA GGAGGTCATT
CAGGGGGTTT ATCGGGATAC CGGGTTCAGG CCGGATGTCC TCTGA
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| Protein sequence | MNVSKLLIGL FAGALSLAVY AQQPIVIKFS HVVAADTPKG KAAEMFAKKA AELTGGKVKV
EVYANSTLYK DKEEMEALQL GAVQMLAPSL AKFGPLGVKE FEVFDLPFIF SDYDALRKVT
NGAVGRQLLA KLEPKGIRGL GYWDNGFKSF SANTPIRTPA DLKGKKMRIQ SSKVLEEQMR
SLGSMPQVMA FSEVYQALQT GVVDGTENPI SNLYTQKMHE VQKYLTLTEH GYLGYAVIVN
KKFWDGLPTD IRKQLEDAME QATRYANQIA KVENDNALEA VKKSGKTTVY VPTKEERLAF
KKALVPVHQK MEGRIGKEVI QGVYRDTGFR PDVL
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