Gene Daro_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2982 
Symbol 
ID3568516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3220024 
End bp3221184 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content59% 
IMG OID637681453 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_286182 
Protein GI71908595 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID[TIGR03300] outer membrane assembly lipoprotein YfgL 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGCC AGCTCATCGC CTTGTTGACT GCAGCCGGCT TGCTGCTTAG CGGCTGCGCT 
ACTATTTCCG ATGGACTGGA TGCGATCAAC CCGTTCTCCA GTTCTGCGCC GAAGATGGCG
CCTTTGCCGC CGCTAGTGGC GACCGCCGAG GTGCGCTCCT TGTGGTCGGC CAGCATCAGC
AAGGCCGGGG ACTACAGTTT TACACCTGCA GTGGTTGATA ACGCGGTCTA CGTTGCCGGT
GCGAATGGCA CGGTCAGCAA GATCGAGGAT GGGAAGACCG TCTGGAAGAT TGATGCTGGT
CAGCCCCTGT CAGCCGGTGT TGGTGCCAAT GCGCGTCTTG TCGTGGTTGC CACACCGAAG
GGAGAAGTTC TGGCGTTCTC GCCGGAAGAC GGCAAAGCGC TGTGGAAAGC ACGTGTCTCG
AGCGAGGTTC TCGCCGCGCC TGCGGTTTCT GATGATGGCG TTGCCGTGAA AAGCGGTGAC
AATCAGGTAT TCCTGCTTGA CGCTGGAGAT GGTGGTCGGA AATGGGCCTA TCAGCGTGCC
ACGCCGCCTT TGTCGGTACG AAGCGCCGGT TCGCCGGTCT TTGCCGATCG TTATTTGTTT
GTCGGCTACC CCGGTGGCAA GCTGGTTGCT TTAGCCTTGC AGAACGGAGC TCCTGTCTGG
GAAGGCGCTG TGGCCTTGCC GAAAGGTGCC ACTGAACTTG ATCGTGTTGC CGATATTGTC
GCCTCGCCGG TTATCGAGGG ACGACAAATT TGTGCCGTGG CATTCCAGGG GCGGGTTGCC
TGCTTCGATA TGGGCCAAGG CGGTGCGATG GTCTGGTCGC GTGACATTTC CTCGGTCTCT
GGTCTCGCCA TGGATGGCCG CTACCTGTTT GTCACTGATG ACAAGGGTGT TGTTTATGCC
TTGGATCGTC TTTCTGGCAG CAGTCTGTGG AAGCAGGACA AGCTGAAAAA CCGTCGCCTT
TCTGCGCCGG TCATTCGGCG TGGTCTGGTT GTCGTGGCAG ATGCCGAAGG CATCGTGCAT
TTCCTTTCTC GTGAAGACGG CAGCTTTGCT GCTCGCCTGA AAACCGATGG CACGCCGGTT
CGCGCGCCTC TTCAATTGCT CGGTTCCTCG GTTCTGGTTC AAACCTCCGG TGGTAGCGTG
AGCGCACTCG AGGCTCAATG A
 
Protein sequence
MSRQLIALLT AAGLLLSGCA TISDGLDAIN PFSSSAPKMA PLPPLVATAE VRSLWSASIS 
KAGDYSFTPA VVDNAVYVAG ANGTVSKIED GKTVWKIDAG QPLSAGVGAN ARLVVVATPK
GEVLAFSPED GKALWKARVS SEVLAAPAVS DDGVAVKSGD NQVFLLDAGD GGRKWAYQRA
TPPLSVRSAG SPVFADRYLF VGYPGGKLVA LALQNGAPVW EGAVALPKGA TELDRVADIV
ASPVIEGRQI CAVAFQGRVA CFDMGQGGAM VWSRDISSVS GLAMDGRYLF VTDDKGVVYA
LDRLSGSSLW KQDKLKNRRL SAPVIRRGLV VVADAEGIVH FLSREDGSFA ARLKTDGTPV
RAPLQLLGSS VLVQTSGGSV SALEAQ