| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_2980 |
|---|
| Symbol | hfq |
|---|
| ID | 3568514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 3218379 |
|---|
| End bp | 3218615 |
|---|
| Gene Length | 237 bp |
|---|
| Protein Length | 78 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637681451 |
|---|
| Product | RNA-binding protein Hfq |
|---|
| Protein accession | YP_286180 |
|---|
| Protein GI | 71908593 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1923] Uncharacterized host factor I protein |
|---|
| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA AAGGGCAACT TTTACAAGAC CCCTTCCTCA ACGCTCTTCG TCGCGAGCAC
GTTCCCGTCT CGATCTACCT GGTAAACGGG ATTAAATTGC AGGGCCAGGT TGAGTCGTTC
GACCAGTATG TCGTGCTGCT CAAAAATACG GTTACGCAGA TGGTATATAA ACACGCCATC
TCTACAGTGG TTCCGGCACG TCCGGTTAAC CTTCAGCAGG AACAGGCGGC GGAATAA
|
|---|
| Protein sequence | MSNKGQLLQD PFLNALRREH VPVSIYLVNG IKLQGQVESF DQYVVLLKNT VTQMVYKHAI
STVVPARPVN LQQEQAAE
|
|---|
| |