Gene Daro_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2978 
Symbol 
ID3568512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3215814 
End bp3217124 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content59% 
IMG OID637681449 
ProductHflK 
Protein accessionYP_286178 
Protein GI71908591 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value0.750881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA ATGACCCGCA GTGGGGCAAC CGTGGCAGCA ATGACGGTGA CAAGCCCAAC 
GGCAATGGTC CGCGCCGACC CAACGATGGC CCACCGGATC TCGAGGAGCT CTGGCGCGAC
TTTAATCGCA AACTGTCCGG CATGTTCGGT AATAAAGGCG GCGGCGGTGG CAATGGCGGT
GGCGATGGGC CCCGCATGCC GAATATCGAT TTCAACCCGA AATTCCTGGG CGGTGGCCTG
GGGTTGTTGG TTGGGCTGGC GGCGGTGGTC TGGCTGGCCT CGGGTTTTTA TATTGTCGAT
GCCTCGCAAC GCGGATTGGT GCTCCAGTTC GGCAGTTTCA AGGAGGCAAC CGAACCTGGT
TTGCGTTGGC GTTTTCCTTA CCCGATTCAG TCGCATGAAC TGGTCAACCT GACGGGGGTG
CGCACGATCG AAATCGGCTA CCGCGGCAGC GAACGCAACA AGGTGCTCAA GGAAGCACTG
ATGCTGACCG ATGACGAAAA CATCGTGAAC ATCCAGTTTG CAGTTCAATA CATCCTGAAG
GATCCAGTCG AGTATTTGTT CAACAATCGT TCTCCGGACG AAGCGGTGAT GGGGGCTGCC
GAAACGGCGG TTCGTGAGAT CGTTGGCAAG AGCAAGATGG ACTATGTGCT CTACGAAGGT
CGGGAGCAGA TCGCCTCGCA GGCATCCAAG TTGATGCAGG ACATCCTTGA CCGTTACCAG
AGCGGCATCC TGATTTCCAA GGTAACGATG CAGAATGCGC AGCCGCCCGA GCAGGTGCAG
TCGGCTTTTG ATGATGCGGT CAAGGCTGGT CAGGATCGTG AGCGCCAGAA GAACGAAGGT
CAGGCCTACG CCAACGACGT TATTCCGAAA GCCAAGGGCA CCGCAGCACG CCTGCTGGAA
GAGGCTAATG GCTACAAGCA GCGCGTGATT TCCTCGGCCG AAGGTGATGC CTCGCGGTTC
AAGCAGGTGC TGACCGAATA CGCCAAGGCG CCGGAAGTGA CGCGTCAGCG CATGTATCTG
GAAACCATGC AGCAAATTTA CGCCAACACC AGCAAGGTGA TGGTGGATGC CAAGGGGCAG
GGCAACCTGT TGTACCTGCC GCTCGACAAG TTGATGCAGG CGACCGGGGC CGCGACTGCT
GCTCAGGCTG CTCCGGAAGC TTCAATTGCA CCGTCGACGG CACGCCCTTC GGCACCGCTA
TCATCCGAGG CGCCGCCGCA ATTGGAGACG GCACCCAAGG TGGGTGGAGG CTCATATTCT
CAGAGTTCGC GCGATGGTTC GCTGCGTTCG CGTGATCGGG AGGGGCGTTG A
 
Protein sequence
MSLNDPQWGN RGSNDGDKPN GNGPRRPNDG PPDLEELWRD FNRKLSGMFG NKGGGGGNGG 
GDGPRMPNID FNPKFLGGGL GLLVGLAAVV WLASGFYIVD ASQRGLVLQF GSFKEATEPG
LRWRFPYPIQ SHELVNLTGV RTIEIGYRGS ERNKVLKEAL MLTDDENIVN IQFAVQYILK
DPVEYLFNNR SPDEAVMGAA ETAVREIVGK SKMDYVLYEG REQIASQASK LMQDILDRYQ
SGILISKVTM QNAQPPEQVQ SAFDDAVKAG QDRERQKNEG QAYANDVIPK AKGTAARLLE
EANGYKQRVI SSAEGDASRF KQVLTEYAKA PEVTRQRMYL ETMQQIYANT SKVMVDAKGQ
GNLLYLPLDK LMQATGAATA AQAAPEASIA PSTARPSAPL SSEAPPQLET APKVGGGSYS
QSSRDGSLRS RDREGR