Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2978 |
Symbol | |
ID | 3568512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3215814 |
End bp | 3217124 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637681449 |
Product | HflK |
Protein accession | YP_286178 |
Protein GI | 71908591 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.750881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCA ATGACCCGCA GTGGGGCAAC CGTGGCAGCA ATGACGGTGA CAAGCCCAAC GGCAATGGTC CGCGCCGACC CAACGATGGC CCACCGGATC TCGAGGAGCT CTGGCGCGAC TTTAATCGCA AACTGTCCGG CATGTTCGGT AATAAAGGCG GCGGCGGTGG CAATGGCGGT GGCGATGGGC CCCGCATGCC GAATATCGAT TTCAACCCGA AATTCCTGGG CGGTGGCCTG GGGTTGTTGG TTGGGCTGGC GGCGGTGGTC TGGCTGGCCT CGGGTTTTTA TATTGTCGAT GCCTCGCAAC GCGGATTGGT GCTCCAGTTC GGCAGTTTCA AGGAGGCAAC CGAACCTGGT TTGCGTTGGC GTTTTCCTTA CCCGATTCAG TCGCATGAAC TGGTCAACCT GACGGGGGTG CGCACGATCG AAATCGGCTA CCGCGGCAGC GAACGCAACA AGGTGCTCAA GGAAGCACTG ATGCTGACCG ATGACGAAAA CATCGTGAAC ATCCAGTTTG CAGTTCAATA CATCCTGAAG GATCCAGTCG AGTATTTGTT CAACAATCGT TCTCCGGACG AAGCGGTGAT GGGGGCTGCC GAAACGGCGG TTCGTGAGAT CGTTGGCAAG AGCAAGATGG ACTATGTGCT CTACGAAGGT CGGGAGCAGA TCGCCTCGCA GGCATCCAAG TTGATGCAGG ACATCCTTGA CCGTTACCAG AGCGGCATCC TGATTTCCAA GGTAACGATG CAGAATGCGC AGCCGCCCGA GCAGGTGCAG TCGGCTTTTG ATGATGCGGT CAAGGCTGGT CAGGATCGTG AGCGCCAGAA GAACGAAGGT CAGGCCTACG CCAACGACGT TATTCCGAAA GCCAAGGGCA CCGCAGCACG CCTGCTGGAA GAGGCTAATG GCTACAAGCA GCGCGTGATT TCCTCGGCCG AAGGTGATGC CTCGCGGTTC AAGCAGGTGC TGACCGAATA CGCCAAGGCG CCGGAAGTGA CGCGTCAGCG CATGTATCTG GAAACCATGC AGCAAATTTA CGCCAACACC AGCAAGGTGA TGGTGGATGC CAAGGGGCAG GGCAACCTGT TGTACCTGCC GCTCGACAAG TTGATGCAGG CGACCGGGGC CGCGACTGCT GCTCAGGCTG CTCCGGAAGC TTCAATTGCA CCGTCGACGG CACGCCCTTC GGCACCGCTA TCATCCGAGG CGCCGCCGCA ATTGGAGACG GCACCCAAGG TGGGTGGAGG CTCATATTCT CAGAGTTCGC GCGATGGTTC GCTGCGTTCG CGTGATCGGG AGGGGCGTTG A
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Protein sequence | MSLNDPQWGN RGSNDGDKPN GNGPRRPNDG PPDLEELWRD FNRKLSGMFG NKGGGGGNGG GDGPRMPNID FNPKFLGGGL GLLVGLAAVV WLASGFYIVD ASQRGLVLQF GSFKEATEPG LRWRFPYPIQ SHELVNLTGV RTIEIGYRGS ERNKVLKEAL MLTDDENIVN IQFAVQYILK DPVEYLFNNR SPDEAVMGAA ETAVREIVGK SKMDYVLYEG REQIASQASK LMQDILDRYQ SGILISKVTM QNAQPPEQVQ SAFDDAVKAG QDRERQKNEG QAYANDVIPK AKGTAARLLE EANGYKQRVI SSAEGDASRF KQVLTEYAKA PEVTRQRMYL ETMQQIYANT SKVMVDAKGQ GNLLYLPLDK LMQATGAATA AQAAPEASIA PSTARPSAPL SSEAPPQLET APKVGGGSYS QSSRDGSLRS RDREGR
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