Gene Daro_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_2977 
Symbol 
ID3568511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3214927 
End bp3215814 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content55% 
IMG OID637681448 
Producthypothetical protein 
Protein accessionYP_286177 
Protein GI71908590 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01932] HflC protein 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCGC GTATCAATCT GTTGGGTGTA GTAATCGCTA CCGTGCTGGT GGTGATGGCG 
ATGTCGATCT TTACAGTCGA CCAGCGTCAA TACGCCGTGG TTTTTCAGTT GGGTGAAGTC
AAGCGAGCAA TCGCCGAGCC CGGACTCTAC TTCAAGGTGC CGATGGTTCA GAATGTGCGC
TATTTTGAAA AGCGCATCAT CACGCTGGAT AATGCCGACC CGGAGCGCTT TATCACCTCC
GAGAAGAAGA ACGTCCTCGT CGACTCCTAT ATCAAGTGGC GCATCGTCGA TCCGAAGCTG
TATTACATTT CGGTCGGTGG CGATGAATCG CGTGCCAAGA CCCGTCTGAA TCAGACAGTT
AATGCTGGTC TGCGCGAGGA GTTCGGTAAA CGTACCGTGC ACGACGTGGT TTCCGGCGAG
CGCGACAAGA TCATGGACCA GATGCGCGAA AAGGCTGATG CCGATGCCCG CAAGATTGGG
GTGCAGATCG TCGACGTCCG TGTGAAGCGT GTGGAATTGC CGACTGAGGT CAGCGAAGCG
GTTTATCGCC GGATGGAAGC AGAGCGCAAG CGCGTCGCCA ACGAATTGCG TTCGGAAGGT
TCTGCCGAGG CGGAAAAGAT TCGCGCCGAC GCCGATCGCC AGCGCGAAAT CATCGTTGCC
GAGGCCTACC GTGATGCCCA GAAGATCAAG GGTGAAGGTG ATGCCAAGGC GACCAATACG
TACGCTCAGG CTTTTGGCCA GAATCCCGAG TTTTATGCCT TCTATCGTAG TCTCGAAGCC
TATCGCGGCA GCTTCAAGAG CAAGAGCGAT GTGCTTGTTC TTGAGCCCAA CTCTGATTTC
TTCAAGTACA TGAAGGGAGT CGGGCGTGGG AATGACAAGG TTAAATGA
 
Protein sequence
MSPRINLLGV VIATVLVVMA MSIFTVDQRQ YAVVFQLGEV KRAIAEPGLY FKVPMVQNVR 
YFEKRIITLD NADPERFITS EKKNVLVDSY IKWRIVDPKL YYISVGGDES RAKTRLNQTV
NAGLREEFGK RTVHDVVSGE RDKIMDQMRE KADADARKIG VQIVDVRVKR VELPTEVSEA
VYRRMEAERK RVANELRSEG SAEAEKIRAD ADRQREIIVA EAYRDAQKIK GEGDAKATNT
YAQAFGQNPE FYAFYRSLEA YRGSFKSKSD VLVLEPNSDF FKYMKGVGRG NDKVK